HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ACO2
aconitase 2
Chromosome 22 Β· 22q13.2
NCBI Gene: 50Ensembl: ENSG00000100412.18HGNC: HGNC:118UniProt: Q99798
137PubMed Papers
22Diseases
0Drugs
82Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
iron ion bindingcitrate metabolic processtricarboxylic acid cyclemitochondrioninfantile cerebellar-retinal degenerationAutosomal dominant optic atrophy, classic typeoptic atrophymitochondrial disease
✦AI Summary

ACO2 encodes aconitase 2, a mitochondrial enzyme that catalyzes the isomerization of citrate to isocitrate via cis-aconitate in the tricarboxylic acid (TCA) cycle 1. The enzyme contains a 4-iron-4-sulfur cluster essential for its catalytic activity and functions primarily in the mitochondrial matrix, though nuclear localization has also been identified as part of a nonclassical nuclear TCA cycle 1. ACO2 plays a crucial role in cellular energy metabolism by facilitating the second step of the TCA cycle, generating metabolic intermediates necessary for ATP production and biosynthetic pathways 2. Pathogenic variants in ACO2 cause dominant and recessive forms of optic atrophy, with biallelic mutations associated with more severe phenotypes including infantile cerebellar-retinal degeneration 3. ACO2 represents the third most frequently mutated gene in autosomal inherited optic neuropathies after OPA1 and WFS1 3. Patient fibroblasts with ACO2 mutations show reduced enzyme abundance and activity, impaired mitochondrial respiration with citrate/pyruvate substrates, and decreased mitochondrial DNA content 3. The protein also serves as a therapeutic target, as Ξ±-synuclein binding to ACO2 contributes to mitochondrial dysfunction in Parkinson's disease models 4.

Sources cited
1
ACO2 catalyzes citrate to isocitrate conversion and exists in both mitochondrial and nuclear compartments
PMID: 34728602
2
ACO2 is a key TCA cycle enzyme involved in mitochondrial metabolism regulation
PMID: 35880522
3
ACO2 mutations cause dominant/recessive optic atrophy and represent the third most common cause of inherited optic neuropathies
PMID: 34056600
4
ACO2 serves as a therapeutic target in Parkinson's disease through Ξ±-synuclein interactions
PMID: 39427443
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜22
infantile cerebellar-retinal degenerationOpen Targets
0.82Strong
Autosomal dominant optic atrophy, classic typeOpen Targets
0.72Strong
optic atrophyOpen Targets
0.60Moderate
mitochondrial diseaseOpen Targets
0.50Moderate
optic atrophy 9Open Targets
0.50Moderate
genetic disorderOpen Targets
0.48Moderate
Retinal dystrophyOpen Targets
0.40Moderate
Autosomal recessive isolated optic atrophyOpen Targets
0.37Weak
Optic neuropathyOpen Targets
0.34Weak
acute intermittent porphyriaOpen Targets
0.34Weak
isolated macular dystrophyOpen Targets
0.27Weak
refractive errorOpen Targets
0.25Weak
mathematical abilityOpen Targets
0.21Weak
NeurodegenerationOpen Targets
0.17Weak
Global developmental delayOpen Targets
0.17Weak
Brain atrophyOpen Targets
0.17Weak
Central hypoventilationOpen Targets
0.17Weak
Progressive microcephalyOpen Targets
0.17Weak
asthmaOpen Targets
0.15Weak
smoking cessationOpen Targets
0.14Weak
Infantile cerebellar-retinal degenerationUniProt
Optic atrophy 9UniProt
Pathogenic Variants82
NM_001098.3(ACO2):c.2011C>T (p.Arg671Trp)Pathogenic
not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 671
NM_001098.3(ACO2):c.684+1G>TLikely pathogenic
not provided|ACO2-related disorder
β˜…β˜…β˜†β˜†2025
NM_001098.3(ACO2):c.2105_2106del (p.Gln702fs)Pathogenic
Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 702
NM_001098.3(ACO2):c.2338_2339del (p.Gln780fs)Likely pathogenic
Infantile cerebellar-retinal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 780
NM_001098.3(ACO2):c.1132C>T (p.Arg378Ter)Pathogenic
not provided|Optic neuropathy
β˜…β˜…β˜†β˜†2025β†’ Residue 378
NM_001098.3(ACO2):c.822dup (p.Ile275fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 275
NM_001098.3(ACO2):c.1507G>T (p.Gly503Ter)Pathogenic
Optic atrophy 9|not provided
β˜…β˜…β˜†β˜†2022β†’ Residue 503
NM_001098.3(ACO2):c.1390G>T (p.Glu464Ter)Pathogenic
Infantile cerebellar-retinal degeneration|not provided
β˜…β˜…β˜†β˜†2022β†’ Residue 464
NM_001098.3(ACO2):c.250C>T (p.Arg84Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2022β†’ Residue 84
NM_001098.3(ACO2):c.1136dup (p.Leu381fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2022β†’ Residue 381
NM_001098.3(ACO2):c.1776_1783del (p.Cys592_Asp595delinsTer)Pathogenic
Infantile cerebellar-retinal degeneration
β˜…β˜†β˜†β˜†2025β†’ Residue 592
NM_001098.3(ACO2):c.1032+1G>TLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_001098.3(ACO2):c.1128_1134dup (p.Val379fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 379
NM_001098.3(ACO2):c.1559del (p.Lys520fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 520
NM_001098.3(ACO2):c.1666del (p.Val556fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 556
NC_000022.11:g.41468643T>CPathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_001098.3(ACO2):c.1738G>T (p.Glu580Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 580
NM_001098.3(ACO2):c.664T>C (p.Trp222Arg)Likely pathogenic
Optic atrophy 9
β˜…β˜†β˜†β˜†2025β†’ Residue 222
NM_001098.3(ACO2):c.499A>T (p.Lys167Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 167
NM_001098.3(ACO2):c.715_716del (p.Ser239fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 239
View on ClinVar β†—
Related Genes
DAP3Protein interaction100%MRPS5Protein interaction100%MRPS15Protein interaction100%MRPS6Protein interaction100%MRPS16Protein interaction100%IDH2Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Brain
25%
Liver
9%
Lung
8%
Bone Marrow
6%
Ovary
5%
Gene Interaction Network
Click a node to explore
ACO2DAP3MRPS5MRPS15MRPS6MRPS16IDH2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q99798
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.49Moderately Constrained
pLIβ“˜
0.98Intolerant
Observed/Expected LoF0.36 [0.27–0.49]
RankingsWhere ACO2 stands among ~20K protein-coding genes
  • #3,361of 20,598
    Most Researched137 Β· top quartile
  • #906of 5,498
    Most Pathogenic Variants82 Β· top quartile
  • #2,879of 17,882
    Most Constrained (LOEUF)0.49 Β· top quartile
Genes detectedACO2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Episodic Ataxias: Primary and Secondary Etiologies, Treatment, and Classification Approaches.
PMID: 37008993
Tremor Other Hyperkinet Mov (N Y) Β· 2023
1.00
2
Nuclear Receptor NR1D1 Regulates Abdominal Aortic Aneurysm Development by Targeting the Mitochondrial Tricarboxylic Acid Cycle Enzyme Aconitase-2.
PMID: 35880522
Circulation Β· 2022
0.90
3
Dominant
PMID: 34056600
Brain Commun Β· 2021
0.80
4
The existence of a nonclassical TCA cycle in the nucleus that wires the metabolic-epigenetic circuitry.
PMID: 34728602
Signal Transduct Target Ther Β· 2021
0.70
5
Clinical and genetic landscape of optic atrophy in 826 families: insights from 50 nuclear genes.
PMID: 39423307
Brain Β· 2025
0.60