HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ADAT3
adenosine deaminase tRNA specific 3
Chromosome 19 Β· 19p13.3
NCBI Gene: 113179HGNC: HGNC:25151UniProt: Q96EY9
20PubMed Papers
1Diseases
0Drugs
4Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingnucleuscytoplasmnucleoplasmNeurodevelopmental disorder with brain abnormalities, poor growth, and dysmorphic facies
✦AI Summary

ADAT3 is a non-catalytic regulatory subunit of the ADAT2/ADAT3 heterodimeric complex that catalyzes adenosine-to-inosine deamination at the wobble position (position 34) of tRNA anticodons 1. This modification is essential for translational decoding, as inosine-34 can pair with uracil, cytosine, and adenine at the third mRNA codon position, expanding codon recognition capacity 2. ADAT3 functions as a regulatory subunit required for proper complex assembly and tRNA substrate positioning; its N-terminus binds tRNA while its C-terminal domain forms part of the catalytic center with ADAT2 3. Beyond tRNA editing, the ADAT2/ADAT3 complex is critical for radial migration of cortical projection neurons during brain development, independent of its catalytic function 4. Loss-of-function ADAT3 variants cause autosomal recessive neurodevelopmental disorders characterized by intellectual disability, microcephaly, growth failure, strabismus, hypotonia, and dysmorphic features 5. ADAT3 mutations impair complex stability, nuclear localization, and catalytic activity, reducing tRNA wobble inosine levels with cascading effects on translational fidelity and neuronal development 4. Clinical significance includes ADAT3 variants accounting for approximately 26% of diagnosed Mendelian etiologies in cryptic cerebral palsy cohorts, making it an important diagnostic consideration 6.

Sources cited
1
ADAT3 variants impair complex activity and neuronal migration; severity of migration defects correlates with degree of functional loss
PMID: 40120092
2
ADAT3 variants impair interaction with ADAT2 and affect nuclear localization; wobble inosine deficiency causes intellectual disability
PMID: 32763916
3
ADAT3-V144M mutation causes increased protein aggregation and defects in ADAT2/3 complex activity; ADAT2 overexpression can suppress aggregation
PMID: 31263000
4
ADAT3-related intellectual disability phenotype includes cognitive impairment, strabismus, growth failure, microcephaly, tone abnormalities, and dysmorphic features
PMID: 26842963
5
ADAT3 pathogenic variants identified in 26% of cryptic cerebral palsy patients with diagnostic yield
PMID: 35076175
6
ADAT2 and ADAT3 function as heterodimer catalyzing inosine formation at wobble position in eukaryotic tRNAs
PMID: 12457566
7
ADAT3 mutations cause intellectual disability syndrome with features including gait difficulties, instability, and contractures
PMID: 30296593
8
ADAT3 compound heterozygous variants c.219dupA and c.587C>T cause mental retardation autosomal recessive 36
PMID: 35405382
Disease Associationsβ“˜1
Neurodevelopmental disorder with brain abnormalities, poor growth, and dysmorphic faciesUniProt
Pathogenic Variants4
NM_138422.4(ADAT3):c.24_37del (p.Pro10fs)Likely pathogenic
not provided|Intellectual disability-strabismus syndrome
β˜…β˜…β˜†β˜†2024β†’ Residue 10
NM_138422.4(ADAT3):c.319G>A (p.Glu107Lys)Likely pathogenic
Intellectual disability-strabismus syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 107
NM_138422.4(ADAT3):c.159_160del (p.Asp55fs)Likely pathogenic
Intellectual disability-strabismus syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 55
NM_138422.4(ADAT3):c.99_106dup (p.Glu36fs)Pathogenic
Intellectual disability-strabismus syndrome
β˜†β˜†β˜†β˜†2021β†’ Residue 36
View on ClinVar β†—
Related Genes
TK1Protein interaction100%ADAT1Protein interaction100%ADAT2Protein interaction83%TYMSProtein interaction82%UPRTProtein interaction77%NT5EProtein interaction75%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
ADAT3TK1ADAT1ADAT2TYMSUPRTNT5E
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q96EY9
View on AlphaFold β†—
RankingsWhere ADAT3 stands among ~20K protein-coding genes
  • #14,094of 20,598
    Most Researched20
  • #3,857of 5,498
    Most Pathogenic Variants4
Genes detectedADAT3
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
ADAT3 variants disrupt the activity of the ADAT tRNA deaminase complex and impair neuronal migration.
PMID: 40120092
Brain Β· 2025
1.00
2
Mendelian etiologies identified with whole exome sequencing in cerebral palsy.
PMID: 35076175
Ann Clin Transl Neurol Β· 2022
0.90
3
Generation of a human induced pluripotent stem cell line FMUPDCi001-A from a patient with mental retardation, autosomal recessive 36 (MRT36) carrying the variants c.219dupA and c.587CΒ >Β T in ADAT3.
PMID: 35405382
Stem Cell Res Β· 2022
0.80
4
Identification and rescue of a tRNA wobble inosine deficiency causing intellectual disability disorder.
PMID: 32763916
RNA Β· 2020
0.70
5
Formation of tRNA Wobble Inosine in Humans Is Disrupted by a Millennia-Old Mutation Causing Intellectual Disability.
PMID: 31263000
Mol Cell Biol Β· 2019
0.60