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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ALG1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase
Chromosome 16 · 16p13.3
NCBI Gene: 56052Ensembl: ENSG00000033011.14HGNC: HGNC:18294UniProt: A0A804HJL6
71PubMed Papers
21Diseases
0Drugs
121Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
dolichol-linked oligosaccharide biosynthetic processprotein N-linked glycosylationchitobiosyldiphosphodolichol beta-mannosyltransferase activitymembraneALG1-congenital disorder of glycosylationcongenital disorder of glycosylationneurodegenerative diseasegenetic disorder
✦AI Summary

ALG1 encodes a β1,4-mannosyltransferase that catalyzes the initial step of mannose addition in N-linked protein glycosylation 1. Specifically, ALG1 adds the first mannose residue to chitobiosyldiphosphodolichol on the cytoplasmic face of the endoplasmic reticulum membrane, producing Man1GlcNAc(2)-PP-dolichol, a substrate for subsequent ALG2-mediated glycosylation 2. This enzyme is essential for assembling the dolichol-linked oligosaccharide (DLO) precursor containing 14 sugars that is transferred to nascent proteins by oligosaccharyltransferases 3. The N-terminal transmembrane domain is critical for catalytic activity 3. Pathogenic variants in ALG1 cause ALG1-CDG, a rare autosomal recessive congenital disorder of glycosylation 4. ALG1-CDG presents with multi-organ involvement including seizures, developmental delay, hypotonia, and cardiac/liver involvement, with severity correlating to specific mutation locations 4. Patient fibroblasts show dysregulated proteomes, reduced high-mannose and complex/hybrid glycopeptides, and accumulated short oligosaccharides as biomarkers 5. Additionally, ALG1 deficiency promotes hepatocellular carcinoma cell migration through altered N-cadherin glycosylation, suggesting roles beyond glycosylation disorders 6. A tetrasaccharide biomarker (NeuAc-Gal-GlcNAc2) detectable in all ALG1-CDG patients provides diagnostic utility 1.

Sources cited
1
ALG1 encodes β1,4 mannosyltransferase catalyzing addition of first mannose to form dolichol-linked oligosaccharide; ALG1-CDG is autosomal recessive; NeuAc-Gal-GlcNAc2 is biomarker detected in all patients
PMID: 26931382
2
ALG1 adds first mannose onto GlcNAc2-PP-Dol to produce Man1GlcNAc2-PP-Dol; ALG1 mutations cause ALG1-CDG
PMID: 27670784
3
ALG1 catalyzes addition of first mannose molecule to DLO precursor; N-terminal transmembrane domain plays important role in catalytic reaction
PMID: 40328714
4
ALG1-CDG causes epileptic seizures, developmental delay, muscular hypotonia, liver and cardiac involvement; phenotype severity correlates with mutation location in conserved regions
PMID: 37204045
5
ALG1-CDG fibroblasts show reduced high-mannose and complex/hybrid glycopeptides and accumulated short oligosaccharides including chitobiose trisaccharides and tetrasaccharides
PMID: 38470198
6
ALG1 knockdown reduces N-cadherin glycosylation and promotes hepatocellular carcinoma cell migration
PMID: 36939752
Disease Associationsⓘ21
ALG1-congenital disorder of glycosylationOpen Targets
0.86Strong
congenital disorder of glycosylationOpen Targets
0.61Moderate
neurodegenerative diseaseOpen Targets
0.54Moderate
genetic disorderOpen Targets
0.51Moderate
congenital disorder of glycosylation type IOpen Targets
0.44Moderate
EncephalopathyOpen Targets
0.43Moderate
congenital nephrotic syndrome, Finnish typeOpen Targets
0.29Weak
PMM2-congenital disorder of glycosylationOpen Targets
0.27Weak
focal segmental glomerulosclerosisOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.09Suggestive
secondary malignant neoplasmOpen Targets
0.07Suggestive
systemic inflammatory response syndromeOpen Targets
0.07Suggestive
Peyronie diseaseOpen Targets
0.06Suggestive
smoking initiationOpen Targets
0.06Suggestive
breast cancerOpen Targets
0.06Suggestive
liver diseaseOpen Targets
0.06Suggestive
rhabdomyolysisOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.06Suggestive
schizophreniaOpen Targets
0.05Suggestive
alcohol drinkingOpen Targets
0.05Suggestive
Congenital disorder of glycosylation 1KUniProt
Pathogenic Variants121
NM_019109.5(ALG1):c.1342C>T (p.Arg448Ter)Likely pathogenic
not provided|ALG1-congenital disorder of glycosylation
★★☆☆2026→ Residue 448
NM_019109.5(ALG1):c.773C>T (p.Ser258Leu)Pathogenic
ALG1-congenital disorder of glycosylation|not provided|Inborn genetic diseases|Congenital disorder of glycosylation|Finnish congenital nephrotic syndrome|Encephalopathy|ALG12-congenital disorder of glycosylation
★★☆☆2026→ Residue 258
NM_019109.5(ALG1):c.1187+3A>GPathogenic
ALG1-congenital disorder of glycosylation|not provided|Congenital disorder of glycosylation|Encephalopathy|Congenital disorder of glycosylation type I|ALG1-related disorder
★★☆☆2026
NM_019109.5(ALG1):c.841G>T (p.Val281Phe)Pathogenic
Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation
★★☆☆2026→ Residue 281
NM_019109.5(ALG1):c.212C>T (p.Ser71Phe)Pathogenic
Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation
★★☆☆2026→ Residue 71
NM_019109.5(ALG1):c.1187+2T>CPathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025
NM_019109.5(ALG1):c.989del (p.Ser330fs)Pathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 330
NM_019109.5(ALG1):c.1312C>T (p.Arg438Trp)Pathogenic
Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation|Inborn genetic diseases
★★☆☆2025→ Residue 438
NM_019109.5(ALG1):c.1163C>T (p.Pro388Leu)Likely pathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 388
NM_019109.5(ALG1):c.1076C>T (p.Ser359Leu)Pathogenic
Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation|not provided
★★☆☆2025→ Residue 359
NM_019109.5(ALG1):c.1025A>C (p.Gln342Pro)Pathogenic
ALG1-congenital disorder of glycosylation|not provided|Inborn genetic diseases
★★☆☆2025→ Residue 342
NM_019109.5(ALG1):c.304C>T (p.Gln102Ter)Pathogenic
not provided|ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 102
NM_019109.5(ALG1):c.598C>T (p.Arg200Ter)Pathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 200
NM_019109.5(ALG1):c.539+1G>ALikely pathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025
NM_019109.5(ALG1):c.1261C>T (p.Gln421Ter)Pathogenic
ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 421
NM_019109.5(ALG1):c.823G>T (p.Glu275Ter)Pathogenic
not provided|ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 275
NM_019109.5(ALG1):c.866A>G (p.Asp289Gly)Likely pathogenic
Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 289
NM_019109.5(ALG1):c.1250_1251insTG (p.Ala418fs)Pathogenic
not provided|ALG1-congenital disorder of glycosylation|Congenital disorder of glycosylation
★★☆☆2025→ Residue 418
NM_019109.5(ALG1):c.1188-2A>GPathogenic
not provided|Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation
★★☆☆2025
NM_019109.5(ALG1):c.1079C>T (p.Ala360Val)Pathogenic
not provided|Inborn genetic diseases|Congenital disorder of glycosylation|ALG1-congenital disorder of glycosylation
★★☆☆2025→ Residue 360
View on ClinVar ↗
Related Genes
ALG2Protein interaction99%ALG12Protein interaction99%SEC14L5Protein interaction96%GMPPAProtein interaction93%ALG3Protein interaction90%GMDSProtein interaction87%
Tissue Expression6 tissues
Liver
100%
Brain
75%
Lung
61%
Ovary
61%
Bone Marrow
59%
Heart
42%
Gene Interaction Network
Click a node to explore
ALG1ALG2ALG12SEC14L5GMPPAALG3GMDS
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9BT22
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.42LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.15 [0.94–1.42]
RankingsWhere ALG1 stands among ~20K protein-coding genes
  • #6,608of 20,598
    Most Researched71
  • #649of 5,498
    Most Pathogenic Variants121 · top quartile
  • #14,636of 17,882
    Most Constrained (LOEUF)1.42
Genes detectedALG1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A novel variant in ALG1 gene associated with congenital disorder of glycosylation: A case report and short literature review.
PMID: 37204045
Mol Genet Genomic Med · 2023
1.00
2
Modeling neurodevelopmental disorder-associated human
PMID: 38412125
Proc Natl Acad Sci U S A · 2024
0.90
3
[Prokaryotic expression of human Alg1 protein and analysis of the transmembrane domain properties].
PMID: 40328714
Sheng Wu Gong Cheng Xue Bao · 2025
0.80
4
PMID: 20301507
0.70
5
Dysregulated proteome and N-glycoproteome in ALG1-deficient fibroblasts.
PMID: 38470198
Proteomics · 2024
0.60