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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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APOBEC3A
apolipoprotein B mRNA editing enzyme catalytic subunit 3A
Chromosome 22 · 22q13.1
NCBI Gene: 200315Ensembl: ENSG00000128383.14HGNC: HGNC:17343UniProt: A0A0K0MJ49
161PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytoplasmcytidine deaminase activityprotein bindingtransposable element silencingbreast carcinomaneurodegenerative diseasebreast cancerbreast neoplasm
✦AI Summary

APOBEC3A is a cytidine deaminase that catalyzes cytosine-to-uridine editing of single-stranded DNA, particularly in stem-loop secondary structures 1. As part of the innate immune response, APOBEC3A potently restricts viral infections, including human papillomavirus and herpesviruses, by editing viral genomes 23. However, APOBEC3A also generates prevalent mutational signatures in human cancer cells, with evidence establishing it as the primary driver of APOBEC3-associated mutations across breast, bladder, and lymphoma cancers 4. Therapy-induced APOBEC3A expression in lung cancer cells drives sustained mutagenesis and genomic instability in drug-tolerant persisters, promoting evolution toward acquired drug resistance 5. APOBEC3A activity is detected in lung cancer tumors through RNA single-base substitution signatures, linking its expression to intratumoral heterogeneity and metastatic potential 6. The enzyme generates distinct single-strand cytosine deamination damage signatures detectable at single-molecule resolution 7. APOBEC3A is enriched in specific immune cell subsets within ovarian cancer microenvironments 8. This dual functionality—antiviral defense versus cancer-promoting mutagenesis—represents a critical clinical consideration, as APOBEC3A suppression may prevent acquired resistance to targeted therapies.

Sources cited
1
Therapy-induced APOBEC3A drives mutagenesis and genomic instability in drug-tolerant cancer cells, promoting acquired drug resistance
PMID: 37407818
2
APOBEC3A is the main driver of APOBEC3-associated mutational signatures in human cancer cells
PMID: 35859169
3
APOBEC3A potently inhibits HPV infection and plays a role in antiviral immune response
PMID: 28825669
4
APOBEC3A provides defense against herpesvirus infections through DNA cytosine deamination
PMID: 33671095
5
APOBEC3A preferentially targets single-stranded DNA regions with stem-loop secondary structures
PMID: 38499542
6
APOBEC3A activity contributes to RNA editing signatures in lung cancer tumors and relates to metastatic potential
PMID: 37046093
7
APOBEC3A generates a single-strand damage signature involving cytosine deamination detectable at single-molecule resolution
PMID: 38867045
8
APOBEC3A is enriched in specific immune cell subsets within ovarian cancer microenvironments
PMID: 35675036
Disease Associationsⓘ20
breast carcinomaOpen Targets
0.41Moderate
neurodegenerative diseaseOpen Targets
0.40Weak
breast cancerOpen Targets
0.40Weak
breast neoplasmOpen Targets
0.29Weak
estrogen-receptor positive breast cancerOpen Targets
0.29Weak
urinary bladder carcinomaOpen Targets
0.13Weak
neoplasmOpen Targets
0.10Suggestive
cancerOpen Targets
0.09Suggestive
diffuse large B-cell lymphomaOpen Targets
0.08Suggestive
cervical cancerOpen Targets
0.08Suggestive
infectionOpen Targets
0.07Suggestive
urinary bladder cancerOpen Targets
0.06Suggestive
head and neck squamous cell carcinomaOpen Targets
0.05Suggestive
HIV-1 infectionOpen Targets
0.05Suggestive
endometrial cancerOpen Targets
0.04Suggestive
pancreatic adenocarcinomaOpen Targets
0.04Suggestive
Crohn's diseaseOpen Targets
0.04Suggestive
psoriasisOpen Targets
0.04Suggestive
bladder tumorOpen Targets
0.04Suggestive
squamous cell carcinomaOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
COX7CProtein interaction100%UQCR10Protein interaction100%UQCRFS1Protein interaction100%CYC1Protein interaction100%UQCRBProtein interaction100%UQCRQProtein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
37%
Liver
3%
Heart
1%
Ovary
1%
Brain
1%
Gene Interaction Network
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APOBEC3ACOX7CUQCR10UQCRFS1CYC1UQCRBUQCRQ
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt P31941
View on AlphaFold ↗
RankingsWhere APOBEC3A stands among ~20K protein-coding genes
  • #2,783of 20,598
    Most Researched161 · top quartile
Genes detectedAPOBEC3A
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
Single-Cell RNA Sequencing Reveals the Tissue Architecture in Human High-Grade Serous Ovarian Cancer.
PMID: 35675036
Clin Cancer Res · 2022
1.00
2
Therapy-induced APOBEC3A drives evolution of persistent cancer cells.
PMID: 37407818
Nature · 2023
0.90
3
Mechanisms of APOBEC3 mutagenesis in human cancer cells.
PMID: 35859169
Nature · 2022
0.80
4
Genomic-transcriptomic evolution in lung cancer and metastasis.
PMID: 37046093
Nature · 2023
0.70
5
Mutational impact of APOBEC3A and APOBEC3B in a human cell line and comparisons to breast cancer.
PMID: 38033156
PLoS Genet · 2023
0.68