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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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APOL2
apolipoprotein L2
Chromosome 22 · 22q12.3
NCBI Gene: 23780Ensembl: ENSG00000128335.15HGNC: HGNC:619UniProt: Q9BQE5
54PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
membraneprotein bindinglipid bindinglipid transportphosphorus metabolism diseasechronic kidney diseaseneoplasmhypertrophic cardiomyopathy
✦AI Summary

APOL2 is an endoplasmic reticulum-localized lipid-binding protein with emerging roles in multiple physiological and pathological processes. The protein contains a non-classical four-helix bundle motif in its N-terminal domain structurally related to other apolipoprotein L family members 1. While initially characterized as a BH3-motif-containing protein, APOL2 does not function as a classical BH3-only pro-death protein and does not regulate apoptosis or autophagy 2. Recent evidence reveals distinct functions: (1) In liver fibrosis, TGF-β1 stimulation induces APOL2 in hepatic stellate cells, where it binds SERCA2 to trigger ER stress and activate the PERK-HES1 axis, promoting fibrosis progression 3. (2) In gut immunity, APOL2 (human equivalent of mouse APOL9a/b) specifically coats Bacteroidales bacteria through ceramide-1-phosphate interactions, inducing outer membrane vesicle production that enhances intestinal immune responses 4. (3) In gastric cancer, APOL2 stabilizes Ku80 protein via enhanced deubiquitylation, promoting NHEJ-mediated DNA repair and conferring radioresistance, with high expression correlating to poor prognosis 5. Circulating APOL2 levels are reduced in APOL1 risk allele carriers, suggesting complex regulation within the apolipoprotein L family 6. APOL2 expression is additionally implicated in cholesterol metabolism and cancer stem cell drug resistance pathways 7.

Sources cited
1
APOL2 is an ER-rich protein induced in hepatic stellate cells by TGF-β1, binds SERCA2 to trigger ER stress and PERK-HES1 signaling, promoting liver fibrosis
PMID: 39103634
2
APOL2 is the human equivalent of mouse APOL9a/b, coats gut bacteria through ceramide-1-phosphate lipid interactions, and modulates gut immunity
PMID: 40369072
3
APOL2 stabilizes Ku80 protein to enhance NHEJ-mediated DNA repair and radioresistance in gastric cancer; high expression correlates with poor prognosis
PMID: 40953331
4
APOL2 contains a BH3-like motif but does not function as a BH3-only protein and does not regulate apoptosis or autophagy
PMID: 24901046
5
APOL2 N-terminal domain contains a non-classical four-helix bundle motif structurally related to ApoL1
PMID: 34316015
6
APOL2 circulating protein levels are significantly lower in individuals carrying two APOL1 risk alleles
PMID: 35474272
7
APOL2 is identified as a cholesterol-related gene involved in cancer stem cell drug resistance pathways
PMID: 34629041
Disease Associationsⓘ20
phosphorus metabolism diseaseOpen Targets
0.33Weak
chronic kidney diseaseOpen Targets
0.28Weak
neoplasmOpen Targets
0.08Suggestive
hypertrophic cardiomyopathyOpen Targets
0.07Suggestive
response to stimulusOpen Targets
0.06Suggestive
gastric cancerOpen Targets
0.06Suggestive
kidney transplantOpen Targets
0.04Suggestive
mineral metabolism diseaseOpen Targets
0.04Suggestive
calcium metabolic diseaseOpen Targets
0.04Suggestive
kidney failureOpen Targets
0.04Suggestive
kidney diseaseOpen Targets
0.04Suggestive
ProteinuriaOpen Targets
0.04Suggestive
glomerulonephritisOpen Targets
0.03Suggestive
secondary hyperparathyroidism of renal originOpen Targets
0.03Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
liver diseaseOpen Targets
0.03Suggestive
device complicationOpen Targets
0.03Suggestive
anemia (phenotype)Open Targets
0.03Suggestive
renal dialysisOpen Targets
0.03Suggestive
Abnormality of metabolism/homeostasisOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
APOL5Shared pathway50%APOFShared pathway50%APOL4Shared pathway42%APOL6Shared pathway33%APOLD1Shared pathway25%APOL3Shared pathway25%
Tissue Expression6 tissues
Liver
100%
Lung
71%
Heart
60%
Brain
59%
Ovary
29%
Bone Marrow
11%
Gene Interaction Network
Click a node to explore
APOL2APOL5APOFAPOL4APOL6APOLD1APOL3
PROTEIN STRUCTURE
Preparing viewer…
PDB7LF8 · 2.15 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.70LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.99 [0.58–1.70]
RankingsWhere APOL2 stands among ~20K protein-coding genes
  • #8,278of 20,598
    Most Researched54
  • #16,122of 17,882
    Most Constrained (LOEUF)1.70
Genes detectedAPOL2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A natural small molecule alleviates liver fibrosis by targeting apolipoprotein L2.
PMID: 39103634
Nat Chem Biol · 2025
1.00
2
Targeting symbionts by apolipoprotein L proteins modulates gut immunity.
PMID: 40369072
Nature · 2025
0.90
3
APOL2 Stabilizes Ku80 to Confer NHEJ-Mediated Radioresistance in Gastric Cancer.
PMID: 40953331
Adv Sci (Weinh) · 2025
0.80
4
Apolipoprotein L2 contains a BH3-like domain but it does not behave as a BH3-only protein.
PMID: 24901046
Cell Death Dis · 2014
0.70
5
Alterations in DNA Methylation, Proteomic, and Metabolomic Profiles in African Ancestry Populations with APOL1 Risk Alleles.
PMID: 40193202
J Am Soc Nephrol · 2025
0.60