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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ARFGAP2
ARF GTPase activating protein 2
Chromosome 11 · 11p11.2
NCBI Gene: 84364Ensembl: ENSG00000149182.15HGNC: HGNC:13504UniProt: E9PN48
73PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
Golgi apparatusCOPI coating of Golgi vesicleGTPase activator activitycytosolhypertensionAbnormality of the skeletal systemskin neoplasmacne
✦AI Summary

ARFGAP2 (ARF GTPase activating protein 2) functions as a GTPase-activating protein that regulates vesicular trafficking at the Golgi apparatus by hydrolyzing GTP bound to ARF1 1. Unlike ARFGAP1, ARFGAP2 is specifically recruited to Golgi membranes through direct interactions with coatomer proteins, particularly via a basic stretch that binds the γ1-COP subunit, and requires coatomer for its catalytic activity 23. ARFGAP2 is essential for COPI coat assembly and proper vesicle formation, with knockdown studies showing Golgi unstacking and impaired COPI coat lattice formation 4. The protein works redundantly with ARFGAP3 and ARFGAP1 to regulate Golgi-to-ER retrograde transport, as simultaneous depletion of all three causes accumulation of Golgi proteins in the ER-Golgi intermediate compartment and blocks retrograde trafficking 5. Beyond its classical trafficking role, ARFGAP2 has emerged as a critical regulator of STING-mediated immune signaling, promoting STING proton channel activity and cytokine secretion in hematopoietic cells, thereby contributing to autoinflammatory disease pathogenesis 6. The protein also functions in podocytes to suppress Rac1 activity and protect against kidney injury 7.

Sources cited
1
ARFGAP2 is associated with COP-I-coated vesicles and functions in COP I traffic
PMID: 17760859
2
ARFGAP2 Golgi localization depends on coatomer interaction via a basic stretch
PMID: 19109418
3
ARFGAP2 interacts with γ1-COP subunit and requires coatomer for catalytic activity
PMID: 22375848
4
ARFGAP2 is essential for COPI coat assembly and proper vesicle formation
PMID: 20858901
5
ARFGAP2 works redundantly with ARFGAP1 and ARFGAP3 in Golgi-to-ER retrograde transport
PMID: 19299515
6
ARFGAP2 promotes STING proton channel activity and cytokine secretion in autoinflammatory disease
PMID: 39947179
7
ARFGAP2 (GIT2) suppresses Rac1 activity and protects podocytes from injury
PMID: 40019803
Disease Associationsⓘ20
hypertensionOpen Targets
0.27Weak
Abnormality of the skeletal systemOpen Targets
0.27Weak
skin neoplasmOpen Targets
0.13Weak
acneOpen Targets
0.10Suggestive
skin cancerOpen Targets
0.10Suggestive
radius fractureOpen Targets
0.09Suggestive
venous thromboembolismOpen Targets
0.07Suggestive
deep vein thrombosisOpen Targets
0.07Suggestive
ulna fractureOpen Targets
0.07Suggestive
thrombophiliaOpen Targets
0.07Suggestive
basal cell carcinomaOpen Targets
0.07Suggestive
bone diseaseOpen Targets
0.07Suggestive
bone fractureOpen Targets
0.06Suggestive
heart diseaseOpen Targets
0.05Suggestive
pulmonary embolismOpen Targets
0.05Suggestive
Pulmonary InfarctionOpen Targets
0.05Suggestive
ThrombophlebitisOpen Targets
0.04Suggestive
hypertrophic cardiomyopathyOpen Targets
0.04Suggestive
ThromboembolismOpen Targets
0.04Suggestive
PhlebitisOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ARCN1Protein interaction96%ARF1Protein interaction96%COPG1Protein interaction96%COPG2Protein interaction96%ARF4Protein interaction79%ARF5Protein interaction79%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
95%
Heart
74%
Ovary
70%
Lung
68%
Brain
52%
Gene Interaction Network
Click a node to explore
ARFGAP2ARCN1ARF1COPG1COPG2ARF4ARF5
PROTEIN STRUCTURE
Preparing viewer…
PDB2P57 · 1.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.80LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.62 [0.48–0.80]
RankingsWhere ARFGAP2 stands among ~20K protein-coding genes
  • #6,446of 20,598
    Most Researched73
  • #6,654of 17,882
    Most Constrained (LOEUF)0.80
Genes detectedARFGAP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ArfGAP2 promotes STING proton channel activity, cytokine transit, and autoinflammation.
PMID: 39947179
Cell · 2025
1.00
2
Two human ARFGAPs associated with COP-I-coated vesicles.
PMID: 17760859
Traffic · 2007
0.90
3
Rac1 Suppression by the Focal Adhesion Protein GIT ArfGAP2 and Podocyte Protection.
PMID: 40019803
J Am Soc Nephrol · 2025
0.80
4
ARFGAP2 and ARFGAP3 are essential for COPI coat assembly on the Golgi membrane of living cells.
PMID: 20858901
J Biol Chem · 2010
0.70
5
Discrete determinants in ArfGAP2/3 conferring Golgi localization and regulation by the COPI coat.
PMID: 19109418
Mol Biol Cell · 2009
0.60