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8 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ARL5A
ARF like GTPase 5A
Chromosome 2 · 2q23.3
NCBI Gene: 26225Ensembl: ENSG00000162980.18HGNC: HGNC:696UniProt: Q9Y689
21PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein localization to Golgi membranetrans-Golgi networkGTP bindingintracellular protein transportkidney diseaseRomano-Ward syndromeFamilial progressive cardiac conduction defectfamilial atrial fibrillation
✦AI Summary

ARL5A is a small GTPase that localizes to the trans-Golgi network (TGN) and plays a critical role in endosome-to-Golgi retrograde trafficking 12. Unlike classical ARF proteins, ARL5A lacks ADP-ribosylation enhancing activity. The protein functions as a GTP-binding regulator that facilitates recruitment of the GARP (Golgi-associated retrograde protein) complex to the TGN, which is essential for vesicle tethering and SNARE assembly during retrograde membrane transport 13. ARL5A interacts with Ragulator in response to amino acid availability, suggesting it acts as a nutrient sensor linking amino acid signaling to retrograde trafficking 4. Structurally, ARL5A undergoes typical GDP/GTP cycling characteristic of Ras-related GTPases 5. In colorectal cancer, ARL5A is significantly upregulated and promotes cell proliferation; elevated ARL5A protein levels correlate with poor prognosis 6. Notably, ARL5A also exhibits nuclear localization and interacts with heterochromatin protein 1 in a GTP-dependent manner, suggesting developmental and nuclear regulatory roles beyond its well-characterized trafficking functions 7. The related paralog ARL5B negatively regulates MDA5-dependent antiviral innate immunity independent of its GTPase activity 8.

Sources cited
1
ARL5 localizes to trans-Golgi and facilitates GARP complex recruitment for endosome-to-Golgi traffic
PMID: 25795912
2
ARL5B (paralog) regulates retrograde transport from endosomes to TGN
PMID: 22245584
3
ARL5 interacts with Ragulator in amino acid-dependent manner to stimulate retrograde trafficking
PMID: 30478271
4
ARFRP1 functions upstream of ARL5 to recruit GARP tethering factor to TGN
PMID: 31575603
5
ARL5 structure shows GDP/GTP cycling capability typical of Ras-related GTPases
PMID: 15896705
6
ARL5A is upregulated in colorectal cancer and promotes cell proliferation; high levels predict poor prognosis
PMID: 24327274
7
ARL5 localizes to nuclei/nucleoli, is developmentally regulated, and interacts with heterochromatin protein 1 in GTP-dependent manner
PMID: 12414990
8
ARL5B negatively regulates MDA5-mediated antiviral responses independent of GTPase activity
PMID: 25451939
Disease Associationsⓘ20
kidney diseaseOpen Targets
0.11Weak
Romano-Ward syndromeOpen Targets
0.09Suggestive
Familial progressive cardiac conduction defectOpen Targets
0.09Suggestive
familial atrial fibrillationOpen Targets
0.09Suggestive
Familial short QT syndromeOpen Targets
0.08Suggestive
hypertrophic cardiomyopathyOpen Targets
0.08Suggestive
Rare familial disorder with hypertrophic cardiomyopathyOpen Targets
0.08Suggestive
catecholaminergic polymorphic ventricular tachycardiaOpen Targets
0.08Suggestive
Brugada syndromeOpen Targets
0.08Suggestive
Arrhythmogenic right ventricular dysplasiaOpen Targets
0.08Suggestive
sudden cardiac arrestOpen Targets
0.07Suggestive
atrial fibrillationOpen Targets
0.07Suggestive
Idiopathic ventricular fibrillation, not Brugada typeOpen Targets
0.07Suggestive
dilated cardiomyopathyOpen Targets
0.06Suggestive
cardiac conduction defectOpen Targets
0.06Suggestive
sinoatrial node dysfunction and deafnessOpen Targets
0.06Suggestive
Atrial stand stillOpen Targets
0.06Suggestive
ventricular fibrillation, paroxysmal familial, type 1Open Targets
0.06Suggestive
long QT syndrome 9Open Targets
0.06Suggestive
long QT syndrome 5Open Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ARL5CShared pathway100%ARL5BShared pathway70%ARL4AShared pathway67%VPS45Shared pathway67%LOC107984156Shared pathway67%SCFD2Shared pathway67%
Tissue Expression6 tissues
Heart
100%
Brain
83%
Lung
48%
Liver
42%
Bone Marrow
38%
Ovary
31%
Gene Interaction Network
Click a node to explore
ARL5AARL5CARL5BARL4AVPS45LOC107984156SCFD2
PROTEIN STRUCTURE
Preparing viewer…
PDB2H17 · 1.70 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.93LoF Tolerant
pLIⓘ
0.23Tolerant
Observed/Expected LoF0.44 [0.23–0.93]
RankingsWhere ARL5A stands among ~20K protein-coding genes
  • #13,827of 20,598
    Most Researched21
  • #8,539of 17,882
    Most Constrained (LOEUF)0.93
Genes detectedARL5A
Sources retrieved8 papers
Response time—
📄 Sources
8▼
1
microRNA-202-3p inhibits cell proliferation by targeting ADP-ribosylation factor-like 5A in human colorectal carcinoma.
PMID: 24327274
Clin Cancer Res · 2014
1.00
2
The small G protein Arl5 contributes to endosome-to-Golgi traffic by aiding the recruitment of the GARP complex to the Golgi.
PMID: 25795912
Biol Open · 2015
0.88
3
Arl5b is a Golgi-localised small G protein involved in the regulation of retrograde transport.
PMID: 22245584
Exp Cell Res · 2012
0.75
4
Amino acids stimulate the endosome-to-Golgi trafficking through Ragulator and small GTPase Arl5.
PMID: 30478271
Nat Commun · 2018
0.63
5
2.0 A crystal structure of human ARL5-GDP3'P, a novel member of the small GTP-binding proteins.
PMID: 15896705
Biochem Biophys Res Commun · 2005
0.50