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GeneE
26 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ATP1A1
ATPase Na+/K+ transporting subunit alpha 1
Chromosome 1 Β· 1p13.1
NCBI Gene: 476Ensembl: ENSG00000163399.17HGNC: HGNC:799UniProt: P05023
432PubMed Papers
22Diseases
6Drugs
27Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTransporter
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
lysosomal membranemembrane repolarizationpotassium ion import across plasma membraneresponse to glycosideCharcot-Marie-tooth disease, axonal, type 2DDhypomagnesemia, seizures, and intellectual disability 2congestive heart failureatrial fibrillation
✦AI Summary

ATP1A1 encodes the catalytic alpha-1 subunit of the Na+/K+-ATPase, a ubiquitous plasma membrane pump that hydrolyzes ATP to exchange intracellular sodium for extracellular potassium 12. This ion exchange establishes the electrochemical gradient essential for cellular homeostasis and membrane potential maintenance across all eukaryotic cells 3. ATP1A1 functions within a conserved molecular network; the human-specific protein SP0535 interacts with ATP1A1 to modulate Src kinase phosphorylation, promoting neuronal proliferation and cortical expansion during brain development 4. ATP1A1 mutations have significant clinical relevance. Somatic mutations in ATP1A1 are identified in approximately half of aldosterone-producing adenomas, contributing to primary aldosteronismβ€”the most common form of secondary hypertension affecting ~10% of hypertensive patients 56. Germline ATP1A1 mutations cause Charcot-Marie-Tooth disease, axonal type 2DD, a hereditary neuromuscular disorder 7. During SARS-CoV-2 infection, ATP1A1 directly binds viral RNAs and represents a host dependency factor; pharmacological inhibition of ATP1A1 reduces viral replication in human cells 8. Additionally, ATP1A1 stabilization through its beta-subunit partner ATP1B1 regulates Na+/K+-ATPase function in acute myeloid leukemia pathogenesis 3. In esophageal squamous cell carcinoma, GPR37-mediated ATP1A1 ubiquitination and degradation inhibits tumor progression and radioresistance 9.

Sources cited
1
ATP1A1 catalyzes ATP hydrolysis coupled with sodium-potassium ion exchange across plasma membrane
PMID: 29499166
2
ATP1A1 creates electrochemical gradients providing energy for active nutrient transport
PMID: 30388404
3
ATP1A1 alpha-subunit interacts with beta-subunit ATP1B3 to maintain cellular homeostasis and membrane potential
PMID: 39024560
4
SP0535 interacts with ATP1A1 to release Src kinase, promoting neuronal proliferation and cortical expansion
PMID: 36638273
5
ATP1A1 mutations cause over half of aldosterone-producing adenomas in primary aldosteronism
PMID: 25496839
6
ATP1A1 somatic mutations identified in >90% of aldosterone-producing adenomas; germline mutations cause familial hyperaldosteronism
PMID: 35139664
7
ATP1A1 mutations associated with Charcot-Marie-Tooth disease, axonal type 2DD in neuromuscular cohort
PMID: 34602496
8
ATP1A1 binds SARS-CoV-2 viral RNA; pharmacological inhibition reduces viral replication in human cells
PMID: 33349665
9
GPR37-mediated ATP1A1 ubiquitination inhibits tumor progression and radiation resistance in esophageal squamous cell carcinoma
PMID: 39730361
10
ATP1A1 pathogenic variants show distinct genotype-structure-phenotype relationships compared to paralogs ATP1A2 and ATP1A3
PMID: 30842972
Disease Associationsβ“˜22
Charcot-Marie-tooth disease, axonal, type 2DDOpen Targets
0.79Strong
hypomagnesemia, seizures, and intellectual disability 2Open Targets
0.73Strong
congestive heart failureOpen Targets
0.60Moderate
atrial fibrillationOpen Targets
0.59Moderate
heart failureOpen Targets
0.58Moderate
cardiovascular diseaseOpen Targets
0.55Moderate
aldosterone-producing adenomaOpen Targets
0.55Moderate
Intellectual disabilityOpen Targets
0.54Moderate
neurodegenerative diseaseOpen Targets
0.53Moderate
ArrhythmiaOpen Targets
0.50Moderate
HypomagnesemiaOpen Targets
0.46Moderate
SeizureOpen Targets
0.46Moderate
familial primary hypomagnesemiaOpen Targets
0.46Moderate
Alzheimer diseaseOpen Targets
0.45Moderate
lysosomal storage diseaseOpen Targets
0.45Moderate
multiple sclerosisOpen Targets
0.45Moderate
Parkinson diseaseOpen Targets
0.45Moderate
gastric carcinomaOpen Targets
0.41Moderate
bile duct carcinomaOpen Targets
0.37Weak
Duodenal AdenocarcinomaOpen Targets
0.37Weak
Charcot-Marie-Tooth disease, axonal, type 2DDUniProt
Hypomagnesemia, seizures, and impaired intellectual development 2UniProt
Pathogenic Variants27
NM_000701.8(ATP1A1):c.620C>T (p.Ser207Phe)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD
β˜…β˜…β˜†β˜†2026β†’ Residue 207
NM_000701.8(ATP1A1):c.1775T>C (p.Ile592Thr)Pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD|not provided|Charcot-Marie-Tooth disease type 2A2
β˜…β˜…β˜†β˜†2025β†’ Residue 592
NM_000701.8(ATP1A1):c.1645G>A (p.Gly549Arg)Pathogenic
not provided|Charcot-Marie-tooth disease, axonal, type 2DD
β˜…β˜…β˜†β˜†2025β†’ Residue 549
NM_000701.8(ATP1A1):c.2797G>A (p.Asp933Asn)Pathogenic
not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 933
NM_000701.8(ATP1A1):c.1798C>G (p.Pro600Ala)Pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD|Charcot-Marie-Tooth disease type 2A2|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 600
NM_000701.8(ATP1A1):c.143T>G (p.Leu48Arg)Pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD|not provided|Charcot-Marie-Tooth disease type 2A2
β˜…β˜…β˜†β˜†2023β†’ Residue 48
NM_000701.8(ATP1A1):c.2531T>C (p.Leu844Pro)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD|Intellectual disability
β˜…β˜…β˜†β˜†2021β†’ Residue 844
NM_000701.8(ATP1A1):c.2576T>G (p.Met859Arg)Likely pathogenic
Hypomagnesemia, seizures, and intellectual disability 2
β˜…β˜†β˜†β˜†2026β†’ Residue 859
NM_000701.8(ATP1A1):c.2768T>A (p.Phe923Tyr)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2026β†’ Residue 923
NM_000701.8(ATP1A1):c.1028G>A (p.Cys343Tyr)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD
β˜…β˜†β˜†β˜†2025β†’ Residue 343
NM_000701.8(ATP1A1):c.1001A>C (p.Glu334Ala)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 334
NM_000701.8(ATP1A1):c.1999G>A (p.Gly667Ser)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 667
NM_000701.8(ATP1A1):c.2629G>A (p.Gly877Ser)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 877
NM_000701.8(ATP1A1):c.821C>G (p.Ala274Gly)Likely pathogenic
Hypomagnesemia, seizures, and intellectual disability 2
β˜…β˜†β˜†β˜†2024β†’ Residue 274
NM_000701.8(ATP1A1):c.2590G>A (p.Gly864Arg)Likely pathogenic
Hypomagnesemia, seizures, and intellectual disability 2
β˜…β˜†β˜†β˜†2024β†’ Residue 864
NM_000701.8(ATP1A1):c.1798C>A (p.Pro600Thr)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD|not provided|Charcot-Marie-Tooth disease type 2A2
β˜…β˜†β˜†β˜†2022β†’ Residue 600
NM_000701.8(ATP1A1):c.905T>G (p.Leu302Arg)Pathogenic
Hypomagnesemia, seizures, and intellectual disability 2
β˜…β˜†β˜†β˜†2022β†’ Residue 302
NM_000701.8(ATP1A1):c.1799C>G (p.Pro600Arg)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD
β˜…β˜†β˜†β˜†2022β†’ Residue 600
NM_000701.8(ATP1A1):c.2809_2819del (p.Cys937fs)Likely pathogenic
Charcot-Marie-tooth disease, axonal, type 2DD
β˜…β˜†β˜†β˜†2021β†’ Residue 937
NM_000701.8(ATP1A1):c.998C>G (p.Pro333Arg)Likely pathogenic
Marfanoid habitus and intellectual disability
β˜…β˜†β˜†β˜†β†’ Residue 333
View on ClinVar β†—
Drug Targets6
ACETYLDIGITOXINApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DESLANOSIDEApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DIGITOXINApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DIGOXINApproved
Sodium/potassium-transporting ATPase inhibitor
heart failure
ISTAROXIMEPhase II
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 activator
heart disease
LANATOSIDE CApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
Related Genes
ATP4BProtein interaction100%MAPK3Protein interaction99%PRKACAProtein interaction93%PRKACBProtein interaction93%PRKACGProtein interaction93%SLC9A1Protein interaction92%
Tissue Expression6 tissues
Brain
100%
Lung
80%
Heart
53%
Bone Marrow
39%
Ovary
37%
Liver
31%
Gene Interaction Network
Click a node to explore
ATP1A1ATP4BMAPK3PRKACAPRKACBPRKACGSLC9A1
PROTEIN STRUCTURE
Preparing viewer…
PDB7E20 Β· 2.70 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.19Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.12 [0.08–0.19]
RankingsWhere ATP1A1 stands among ~20K protein-coding genes
  • #645of 20,598
    Most Researched432 Β· top 5%
  • #284of 1,025
    FDA-Approved Drug Targets5
  • #1,882of 5,498
    Most Pathogenic Variants27
  • #381of 17,882
    Most Constrained (LOEUF)0.19 Β· top 5%
Genes detectedATP1A1
Sources retrieved26 papers
Response timeβ€”
πŸ“„ Sources
26β–Ό
1
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
1.00
2
Somatic mutations of the ATP1A1 gene and aldosterone-producing adenomas.
PMID: 25496839
Mol Cell Endocrinol Β· 2015
0.90
3
Targeting the Sodium-Potassium Pump as a Therapeutic Strategy in Acute Myeloid Leukemia.
PMID: 39024560
Cancer Res Β· 2024
0.80
4
Primary Aldosteronism.
PMID: 31327272
Hypertension Β· 2019
0.70
5
Comparative Expression Profiling and Sequence Characterization of ATP1A1 Gene Associated with Heat Tolerance in Tropically Adapted Cattle.
PMID: 34438824
Animals (Basel) Β· 2021
0.68