HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ATP1B3
ATPase Na+/K+ transporting subunit beta 3
Chromosome 3 · 3q23
NCBI Gene: 483Ensembl: ENSG00000069849.12HGNC: HGNC:806UniProt: P54709
115PubMed Papers
20Diseases
6Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
FDA Approved Target
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ATPase activator activityprotein bindingprotein-macromolecule adaptor activityATPase bindingcongestive heart failureatrial fibrillationheart failurecardiovascular disease
✦AI Summary

ATP1B3 encodes the β3 regulatory subunit of the Na+/K+-ATPase, a non-catalytic component essential for assembling the active pump complex with the catalytic α-subunit 1. The Na+/K+-ATPase hydrolyzes ATP to exchange Na+ and K+ ions across the plasma membrane, maintaining cellular homeostasis and membrane potential 1. ATP1B3 interacts with CASPR1 in brain microvascular endothelial cells to facilitate proper plasma membrane localization and glycosylation of the complete pump complex, supporting Na+/K+-ATPase activity required for glutamate transport 2. ATP1B3 exhibits context-specific disease relevance. In acute myeloid leukemia, ATP1B3 represents a selective paralog dependency: when its paralog ATP1B1 is epigenetically silenced, ATP1B3 elimination destabilizes the Na+/K+-ATPase pump, inducing AML cell death both in vitro and in vivo 1. In hepatocellular carcinoma, ATP1B3 is upregulated and functions as an independent prognostic factor correlating with poor overall survival and immune infiltration; silencing ATP1B3 represses HCC cell proliferation and migration while promoting apoptosis 34. ATP1B3 also restricts hepatitis B and HIV-1 replication through NF-κB pathway activation and cooperation with antiviral factor BST-2, increasing interferon-α and interleukin-6 production 56. Novel ATP1B3 fusion genes have been identified in oropharyngeal carcinoma 7. These findings position ATP1B3 as both a potential therapeutic target in hematologic malignancies and an oncogenic driver in solid tumors.

Sources cited
1
ATP1B3 is the β-subunit of the Na/K-ATPase pump that interacts with ATP1A1 to maintain cellular homeostasis and membrane potential; ATP1B3 represents a selective paralog dependency in AML when ATP1B1 is epigenetically silenced
PMID: 39024560
2
ATP1B3 interacts with CASPR1 to facilitate Na+/K+-ATPase maturation, glycosylation, and plasma membrane localization in brain microvascular endothelial cells, supporting glutamate transport
PMID: 30792309
3
ATP1B3 is upregulated in hepatocellular carcinoma and is an independent prognostic factor for poor overall survival; ATP1B3 silencing represses HCC cell proliferation and migration while promoting apoptosis and correlates with immune infiltration
PMID: 33868261
4
ATP1B3 is significantly upregulated in HCC tissues and high expression correlates with poor prognosis, T stage, pathological stage, and pathological grade
PMID: 35790431
5
ATP1B3 overexpression activates NF-κB pathway to restrict hepatitis B virus replication through increased interferon-α and interleukin-6 production, with cooperation from BST-2
PMID: 31556466
6
ATP1B3 is a co-factor that accelerates BST-2 degradation and modulates BST-2-mediated restriction of HIV-1 production and NF-κB activation
PMID: 26694617
7
Novel ATP1B3::GRK7 fusion gene identified as a potential driver in-frame fusion gene in oropharyngeal carcinoma
PMID: 38971117
Disease Associationsⓘ20
congestive heart failureOpen Targets
0.60Moderate
atrial fibrillationOpen Targets
0.59Moderate
heart failureOpen Targets
0.57Moderate
cardiovascular diseaseOpen Targets
0.55Moderate
ArrhythmiaOpen Targets
0.50Moderate
hair colorOpen Targets
0.40Weak
coronary artery diseaseOpen Targets
0.31Weak
bipolar disorderOpen Targets
0.31Weak
response to xenobiotic stimulusOpen Targets
0.30Weak
poisoningOpen Targets
0.29Weak
coronary atherosclerosisOpen Targets
0.29Weak
Supraventricular tachycardiaOpen Targets
0.26Weak
breast carcinomaOpen Targets
0.18Weak
ovarian carcinomaOpen Targets
0.16Weak
breast cancerOpen Targets
0.10Weak
hepatocellular carcinomaOpen Targets
0.10Suggestive
severe pre-eclampsiaOpen Targets
0.09Suggestive
ShockOpen Targets
0.09Suggestive
prostate cancerOpen Targets
0.08Suggestive
rheumatoid arthritisOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets6
ACETYLDIGITOXINApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DESLANOSIDEApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DIGITOXINApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
DIGOXINApproved
Sodium/potassium-transporting ATPase inhibitor
heart failure
ISTAROXIMEPhase II
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 activator
heart disease
LANATOSIDE CApproved
Sodium/potassium-transporting ATPase inhibitor
cardiovascular disease
Related Genes
MAPK3Protein interaction99%SLC9A1Protein interaction92%PRKG1Protein interaction91%ATP1A3Protein interaction90%FXYD2Protein interaction90%FXYD1Protein interaction90%
Tissue Expression6 tissues
Lung
100%
Brain
59%
Bone Marrow
59%
Ovary
49%
Heart
32%
Liver
13%
Gene Interaction Network
Click a node to explore
ATP1B3MAPK3SLC9A1PRKG1ATP1A3FXYD2FXYD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P54709
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.62LoF Tolerant
pLIⓘ
0.79Intermediate
Observed/Expected LoF0.33 [0.19–0.62]
RankingsWhere ATP1B3 stands among ~20K protein-coding genes
  • #4,103of 20,598
    Most Researched115 · top quartile
  • #298of 1,025
    FDA-Approved Drug Targets5
  • #4,332of 17,882
    Most Constrained (LOEUF)0.62 · top quartile
Genes detectedATP1B3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Targeting the Sodium-Potassium Pump as a Therapeutic Strategy in Acute Myeloid Leukemia.
PMID: 39024560
Cancer Res · 2024
1.00
2
Neoadjuvant chemotherapy-induced remodeling of human hormonal receptor-positive breast cancer revealed by single-cell RNA sequencing.
PMID: 38266804
Cancer Lett · 2024
0.90
3
Integrative Transcriptomic, Proteomic and Functional Analysis Reveals ATP1B3 as a Diagnostic and Potential Therapeutic Target in Hepatocellular Carcinoma.
PMID: 33868261
Front Immunol · 2021
0.80
4
ATP1B3 cooperates with BST-2 to promote hepatitis B virus restriction.
PMID: 31556466
J Med Virol · 2020
0.70
5
[Screening and identification of key genes ATP1B3 and ENAH in the progression of hepatocellular carcinoma: based on data mining and clinical validation].
PMID: 35790431
Nan Fang Yi Ke Da Xue Xue Bao · 2022
0.60