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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ATP4A
ATPase H+/K+ transporting subunit alpha
Chromosome 19 · 19q13.12
NCBI Gene: 495Ensembl: ENSG00000105675.9HGNC: HGNC:819UniProt: A0A384MR29
43PubMed Papers
20Diseases
17Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
FDA Approved Target
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
GO:0005615sodium ion export across plasma membraneproton transmembrane transportpotassium ion import across plasma membranegastroesophageal reflux diseasegastric ulcerduodenal ulcerPeptic ulcer
✦AI Summary

ATP4A encodes the catalytic α-subunit of the gastric H+/K+-ATPase pump, a P-type ATPase located on parietal cell apical membranes 1. This enzyme uses ATP hydrolysis to generate a million-fold proton gradient, acidifying gastric juice to pH 1 by exchanging intracellular H+ ions for luminal K+ ions 1. The transport cycle involves ATP-driven phosphorylation, causing conformational shifts between inward-facing (E1) and outward-facing (E2) states 1. ATP4A expression shows age and sex dimorphism, with higher expression in men under 35 years compared to those over 50 2. Clinically, ATP4A dysfunction is relevant to multiple gastric pathologies. In gastric cancer, ATP4A expression is downregulated through intragenic DNA methylation, with methylated ATP4B detectable in patient plasma as a potential biomarker 3. ATP4A, alongside ATP4B, serves as a diagnostic biomarker for gastric cancer using machine learning models, achieving 0.99 AUC on external validation 4. In autoimmune gastritis, ATP4A is extensively downregulated, associated with marked intestinal trans-differentiation and neuroendocrine tumorigenesis risk 5. Additionally, ATP4A autoantibodies appear in pediatric type 1 diabetes patients (17% prevalence), correlating with lower vitamin B12 and ferritin levels, suggesting screening recommendations 6. Proton pump inhibitors like omeprazole and rabeprazole interact potently with ATP4A, informing therapeutic development 1.

Sources cited
1
ATP4A encodes α-subunit of H+/K+-ATPase; mechanism of ion exchange, ATP hydrolysis, and conformational states; inhibitor binding of omeprazole and rabeprazole
PMID: 24432139
2
ATP4A expression higher in men under 35 compared to men over 50; age and sex-dimorphic gene expression in stomach tissue
PMID: 37367232
3
ATP4A downregulation in gastric cancer through intragenic DNA methylation; methylated ATP4B as potential serum biomarker
PMID: 23317218
4
ATP4A as diagnostic biomarker for gastric cancer; machine learning models achieve 0.99 AUC on external validation datasets
PMID: 35812327
5
Extensive downregulation of ATP4A in autoimmune gastritis associated with intestinal trans-differentiation and neuroendocrine tumorigenesis risk
PMID: 37962678
6
ATP4A autoantibodies present in 17% of pediatric type 1 diabetes children; correlate with lower vitamin B12 and ferritin levels
PMID: 28401620
Disease Associationsⓘ20
gastroesophageal reflux diseaseOpen Targets
0.62Moderate
gastric ulcerOpen Targets
0.61Moderate
duodenal ulcerOpen Targets
0.60Moderate
Peptic ulcerOpen Targets
0.60Moderate
Zollinger-Ellison SyndromeOpen Targets
0.60Moderate
esophagitisOpen Targets
0.59Moderate
peptic esophagitisOpen Targets
0.57Moderate
Helicobacter pylori infectious diseaseOpen Targets
0.56Moderate
osteoarthritisOpen Targets
0.55Moderate
rheumatoid arthritisOpen Targets
0.54Moderate
peptic ulcer diseaseOpen Targets
0.53Moderate
angina pectorisOpen Targets
0.53Moderate
transient ischemic attackOpen Targets
0.53Moderate
ankylosing spondylitisOpen Targets
0.52Moderate
hemorrhageOpen Targets
0.51Moderate
gastric cancerOpen Targets
0.51Moderate
ulcer diseaseOpen Targets
0.50Moderate
spondylitisOpen Targets
0.50Moderate
Gastric Mucosa-Associated Lymphoid Tissue LymphomaOpen Targets
0.47Moderate
autoimmune thrombocytopenic purpuraOpen Targets
0.46Moderate
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets17
ABEPRAZANApproved
Potassium-transporting ATPase inhibitor
Peptic ulcer
DEXLANSOPRAZOLEApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
ESOMEPRAZOLEApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
ESOMEPRAZOLE MAGNESIUMApproved
Potassium-transporting ATPase inhibitor
gastric ulcer
ESOMEPRAZOLE SODIUMApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
ESOMEPRAZOLE STRONTIUMApproved
Potassium-transporting ATPase inhibitor
Zollinger-Ellison Syndrome
ILAPRAZOLEApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
LANSOPRAZOLEApproved
Potassium-transporting ATPase inhibitor
OMEPRAZOLEApproved
Potassium-transporting ATPase inhibitor
peptic ulcer disease
OMEPRAZOLE MAGNESIUMPhase III
Potassium-transporting ATPase inhibitor
PANTOPRAZOLEApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
PANTOPRAZOLE SODIUMApproved
Potassium-transporting ATPase inhibitor
Zollinger-Ellison Syndrome
RABEPRAZOLEApproved
Potassium-transporting ATPase inhibitor
gastroesophageal reflux disease
RABEPRAZOLE SODIUMApproved
Potassium-transporting ATPase inhibitor
Zollinger-Ellison Syndrome
TEGOPRAZANApproved
Potassium-transporting ATPase blocker
Peptic ulcer
VONOPRAZANApproved
Potassium-transporting ATPase inhibitor
Peptic ulcer
VONOPRAZAN FUMARATEApproved
Potassium-transporting ATPase inhibitor
myocardial infarction
Related Genes
ATP6V1B1Protein interaction100%ATP6V0A1Protein interaction100%ATP6V0CProtein interaction100%ATP6V0A4Protein interaction100%ATP6V0A2Protein interaction100%TCIRG1Protein interaction99%
Tissue Expression6 tissues
Liver
100%
Ovary
62%
Lung
15%
Brain
15%
Heart
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
ATP4AATP6V1B1ATP6V0A1ATP6V0CATP6V0A4ATP6V0A2TCIRG1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P20648
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.81LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.67 [0.55–0.81]
RankingsWhere ATP4A stands among ~20K protein-coding genes
  • #9,692of 20,598
    Most Researched43
  • #96of 1,025
    FDA-Approved Drug Targets16 · top 10%
  • #6,774of 17,882
    Most Constrained (LOEUF)0.81
Genes detectedATP4A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ATP4A gene regulatory network for fine-tuning of proton pump and ion channels.
PMID: 24432139
Syst Synth Biol · 2013
1.00
2
Differential expression of
PMID: 37367232
Nucleosides Nucleotides Nucleic Acids · 2023
0.90
3
Intragenic DNA methylation concomitant with repression of ATP4B and ATP4A gene expression in gastric cancer is a potential serum biomarker.
PMID: 23317218
Asian Pac J Cancer Prev · 2012
0.80
4
ESRRG, ATP4A, and ATP4B as Diagnostic Biomarkers for Gastric Cancer: A Bioinformatic Analysis Based on Machine Learning.
PMID: 35812327
Front Physiol · 2022
0.70
5
Membrane Proteome-Wide Screening of Autoantibodies in CIDP Using Human Cell Microarray Technology.
PMID: 38484217
Neurol Neuroimmunol Neuroinflamm · 2024
0.60