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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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BATF
basic leucine zipper ATF-like transcription factor
Chromosome 14 · 14q24.3
NCBI Gene: 10538Ensembl: ENSG00000156127.8HGNC: HGNC:958UniProt: Q16520
58PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmprotein bindingsequence-specific double-stranded DNA bindingsequence-specific DNA bindingmultiple sclerosisskin neoplasmnervous system benign neoplasminflammatory bowel disease
✦AI Summary

BATF is a basic leucine zipper transcription factor that plays critical roles in immune cell differentiation and function. It acts as part of the AP-1 transcription factor family, forming heterodimers with JUNB and cooperating with IRF4 or IRF8 to regulate gene expression through AICE sequences 1. BATF controls multiple immune cell lineages, including Th17 cell differentiation and regulatory T cell (Treg) activation in tumor microenvironments 2. In CD8+ T cells, BATF functions as a key regulator of exhaustion versus effector states. It can promote T cell exhaustion by upregulating exhaustion-related genes, but paradoxically, BATF overexpression in CAR-T cells enhances antitumor responses by countering exhaustion when cooperating with IRF4 1. Conversely, BATF depletion in CAR-T cells improves antitumor activity by inducing resistance to exhaustion and promoting central memory cell formation 3. BATF also regulates the exit from quiescence in precursor exhausted T cells, with its targets including TCF-1 4. In cancer therapy contexts, BATF expression correlates with clinical outcomes - high BATF expression in Tregs associates with poor prognosis, while BATF modulation in therapeutic T cells can enhance treatment efficacy 25.

Sources cited
1
BATF cooperates with IRF4 to counter T cell exhaustion and enhance CAR-T cell antitumor responses
PMID: 34282330
2
BATF controls Treg cell differentiation and activation in tumor microenvironments, with high expression correlating with poor cancer prognosis
PMID: 36206353
3
BATF depletion in CAR-T cells enhances antitumor activity by reducing exhaustion and promoting central memory cell formation
PMID: 36240777
4
BATF regulates exit from quiescence in precursor exhausted T cells with TCF-1 as a target
PMID: 37968405
5
BATF is involved in co-expression of cytotoxic and exhaustion gene modules in response to LAG-3 and PD-1 blockade
PMID: 39121849
Disease Associationsⓘ20
multiple sclerosisOpen Targets
0.41Moderate
skin neoplasmOpen Targets
0.36Weak
nervous system benign neoplasmOpen Targets
0.34Weak
inflammatory bowel diseaseOpen Targets
0.33Weak
Crohn's diseaseOpen Targets
0.33Weak
atopic eczemaOpen Targets
0.33Weak
neurodegenerative diseaseOpen Targets
0.29Weak
ovarian neoplasmOpen Targets
0.28Weak
ProptosisOpen Targets
0.28Weak
Abnormality of the immune systemOpen Targets
0.28Weak
skin cancerOpen Targets
0.23Weak
neoplasmOpen Targets
0.11Weak
acute myeloid leukemiaOpen Targets
0.10Suggestive
breast cancerOpen Targets
0.08Suggestive
anaplastic large cell lymphomaOpen Targets
0.08Suggestive
autoimmune diseaseOpen Targets
0.07Suggestive
diffuse large B-cell lymphomaOpen Targets
0.07Suggestive
isolated agammaglobulinemiaOpen Targets
0.07Suggestive
infectionOpen Targets
0.07Suggestive
cancerOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FOSProtein interaction98%HSP90AA1Protein interaction97%JDP2Protein interaction96%JUNBProtein interaction95%JUNDProtein interaction95%CD8AProtein interaction94%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
78%
Liver
17%
Brain
7%
Heart
7%
Ovary
4%
Gene Interaction Network
Click a node to explore
BATFFOSHSP90AA1JDP2JUNBJUNDCD8A
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q16520
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.74LoF Tolerant
pLIⓘ
0.56Intermediate
Observed/Expected LoF0.35 [0.18–0.74]
RankingsWhere BATF stands among ~20K protein-coding genes
  • #7,840of 20,598
    Most Researched58
  • #5,806of 17,882
    Most Constrained (LOEUF)0.74
Genes detectedBATF
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
BATF epigenetically and transcriptionally controls the activation program of regulatory T cells in human tumors.
PMID: 36206353
Sci Immunol · 2022
1.00
2
Single-cell CRISPR screens in vivo map T cell fate regulomes in cancer.
PMID: 37968405
Nature · 2023
0.90
3
Modular pooled discovery of synthetic knockin sequences to program durable cell therapies.
PMID: 37714135
Cell · 2023
0.80
4
Targeting REGNASE-1 programs long-lived effector T cells for cancer therapy.
PMID: 31827283
Nature · 2019
0.70
5
The role of transcription factors in shaping regulatory T cell identity.
PMID: 37336954
Nat Rev Immunol · 2023
0.60