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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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BCAT2
branched chain amino acid transaminase 2
Chromosome 19 Β· 19q13.33
NCBI Gene: 587Ensembl: ENSG00000105552.15HGNC: HGNC:977UniProt: B3KSI3
58PubMed Papers
21Diseases
0Drugs
8Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
mitochondrionbranched-chain-amino-acid:2-oxoglutarate transaminase activitybranched-chain amino acid catabolic processprotein bindinghypervalinemia and hyperleucine-isoleucinemianeurodegenerative diseaseParalytic ileusneoplasm
✦AI Summary

BCAT2 (branched chain amino acid transaminase 2) catalyzes the transamination of essential branched-chain amino acids (leucine, isoleucine, and valine) to their corresponding Ξ±-keto acids, initiating BCAA catabolism 1. This enzymatic activity occurs predominantly in skeletal muscle and is critical for producing acetyl-CoA and other metabolic intermediates that fuel cellular energy production and biosynthesis 21. Mechanistically, BCAT2-mediated BCAA catabolism sustains mitochondrial respiration and enhances BCAA uptake 2. In cancer contexts, BCAT2 upregulation reprograms BCAA metabolism to support tumor development and survival 3. Notably, BCAT2 interacts with PCBP1 to activate PI3K/AKT signaling, promoting cell proliferation while inhibiting autophagy-related apoptosis and ferroptosis 4. Clinically, BCAT2 dysregulation associates with multiple malignancies. Elevated BCAT2 expression correlates with aggressive phenotypes in pancreatic ductal adenocarcinoma, where KRAS-mediated stabilization of BCAT2 drives neoplasia progression 2. Similarly, BCAT2 is upregulated in hepatocellular carcinoma induced by aflatoxin B1 5, acute myeloid leukemia where METTL16-dependent upregulation promotes leukemia stem cell self-renewal 3, and nasopharyngeal carcinoma with therapeutic resistance 6. BCAT2 inhibition or dietary BCAA restriction shows promise in limiting tumor development, suggesting therapeutic potential across multiple cancer types.

Sources cited
1
BCAT2 enhances BCAA uptake to sustain BCAA catabolism and mitochondrial respiration; BCAT2 is elevated in PDAC and its deletion impedes PanIN progression
PMID: 32029896
2
BCAT2 in skeletal muscle dominantly catalyzes transamination of BCAAs; describes BCAT enzymatic mechanism producing BCKAs and glutamate
PMID: 39795113
3
METTL16 promotes expression of BCAT1 and BCAT2 in AML cells; BCAT2 upregulation reprograms BCAA metabolism in leukemia stem cells
PMID: 36608679
4
BCAT2 interacts with PCBP1 to regulate PI3K/AKT signaling and inhibit autophagy-related apoptosis and ferroptosis in prostate cancer
PMID: 40274762
5
BCAT2 identified as one of six core regulatory genes upregulated in AFB1-induced hepatocellular carcinoma via machine learning analysis
PMID: 40392001
6
BCAT2 identified as one of six key genes in BCAA metabolism distinguishing therapeutic sensitivity from resistance in nasopharyngeal carcinoma
PMID: 40083932
Disease Associationsβ“˜21
hypervalinemia and hyperleucine-isoleucinemiaOpen Targets
0.68Moderate
neurodegenerative diseaseOpen Targets
0.24Weak
Paralytic ileusOpen Targets
0.11Weak
neoplasmOpen Targets
0.09Suggestive
cancerOpen Targets
0.08Suggestive
posterior cortical atrophyOpen Targets
0.08Suggestive
bladder transitional cell carcinomaOpen Targets
0.07Suggestive
gastric cancerOpen Targets
0.05Suggestive
Miyoshi myopathyOpen Targets
0.05Suggestive
obesity due to melanocortin 4 receptor deficiencyOpen Targets
0.05Suggestive
colorectal cancerOpen Targets
0.04Suggestive
MODYOpen Targets
0.04Suggestive
hypotrichosis simplexOpen Targets
0.04Suggestive
dry eye syndromeOpen Targets
0.04Suggestive
hawkinsinuriaOpen Targets
0.04Suggestive
Abnormality of the skeletal systemOpen Targets
0.04Suggestive
chronic lymphocytic leukemiaOpen Targets
0.04Suggestive
hypotrichosis 1Open Targets
0.04Suggestive
transient neonatal diabetes mellitusOpen Targets
0.03Suggestive
woolly hair, autosomal recessive 2, with or without hypotrichosisOpen Targets
0.03Suggestive
Hypervalinemia and hyperleucine-isoleucinemiaUniProt
Pathogenic Variants8
NM_001190.4(BCAT2):c.898_899del (p.Leu301fs)Pathogenic
not provided|Hypervalinemia and hyperleucine-isoleucinemia
β˜…β˜…β˜†β˜†2025β†’ Residue 301
NM_001190.4(BCAT2):c.821G>A (p.Trp274Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 274
NM_001190.4(BCAT2):c.600C>A (p.Tyr200Ter)Pathogenic
not provided|Hypervalinemia and hyperleucine-isoleucinemia
β˜…β˜†β˜†β˜†2025β†’ Residue 200
NM_001190.4(BCAT2):c.696-2A>GLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2023
NM_001190.4(BCAT2):c.790G>A (p.Glu264Lys)Pathogenic
Hypervalinemia and hyperleucine-isoleucinemia
β˜†β˜†β˜†β˜†2024β†’ Residue 264
NM_001190.4(BCAT2):c.509G>A (p.Arg170Gln)Pathogenic
Hypervalinemia and hyperleucine-isoleucinemia
β˜†β˜†β˜†β˜†2024β†’ Residue 170
NM_001190.4(BCAT2):c.545T>G (p.Val182Gly)Pathogenic
Hypervalinemia and hyperleucine-isoleucinemia
β˜†β˜†β˜†β˜†2024β†’ Residue 182
NM_001190.4(BCAT2):c.136_147del (p.His46_Pro49del)Pathogenic
Hypervalinemia and hyperleucine-isoleucinemia
β˜†β˜†β˜†β˜†2024β†’ Residue 46
View on ClinVar β†—
Related Genes
CTHProtein interaction94%AGXT2Protein interaction93%IL4I1Protein interaction91%GCLCProtein interaction91%GCLMProtein interaction91%AADATProtein interaction89%
Tissue Expression6 tissues
Ovary
100%
Heart
81%
Liver
67%
Lung
59%
Brain
31%
Bone Marrow
13%
Gene Interaction Network
Click a node to explore
BCAT2CTHAGXT2IL4I1GCLCGCLMAADAT
PROTEIN STRUCTURE
Preparing viewer…
PDB5MPR Β· 1.60 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.04LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.81 [0.64–1.04]
RankingsWhere BCAT2 stands among ~20K protein-coding genes
  • #7,841of 20,598
    Most Researched58
  • #3,079of 5,498
    Most Pathogenic Variants8
  • #10,335of 17,882
    Most Constrained (LOEUF)1.04
Genes detectedBCAT2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Integrating machine learning and molecular docking to decipher the molecular network of aflatoxin B1-induced hepatocellular carcinoma.
PMID: 40392001
Int J Surg Β· 2025
1.00
2
METTL16 drives leukemogenesis and leukemia stem cell self-renewal by reprogramming BCAA metabolism.
PMID: 36608679
Cell Stem Cell Β· 2023
0.90
3
BCAT2-mediated BCAA catabolism is critical for development of pancreatic ductal adenocarcinoma.
PMID: 32029896
Nat Cell Biol Β· 2020
0.80
4
Enhanced BCAT1 activity and BCAA metabolism promotes RhoC activity in cancer progression.
PMID: 37337119
Nat Metab Β· 2023
0.70
5
Targeting BCAT1 Combined with Ξ±-Ketoglutarate Triggers Metabolic Synthetic Lethality in Glioblastoma.
PMID: 35499760
Cancer Res Β· 2022
0.60