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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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BDP1
BDP1 general transcription factor IIIB subunit
Chromosome 5 Β· 5q13.2
NCBI Gene: 55814Ensembl: ENSG00000145734.20HGNC: HGNC:13652UniProt: A0A0G2JNU3
39PubMed Papers
1Diseases
0Drugs
3Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingpositive regulation of transcription by RNA polymerase IIInucleoplasmtranscription factor TFIIIB complexDeafness, autosomal recessive, 112
✦AI Summary

BDP1 encodes a subunit of transcription factor IIIB (TFIIIB), which is essential for RNA polymerase III transcription initiation. The protein functions as a general activator required for transcription from all three types of polymerase III promoters 1. Structurally, BDP1 shows similarities to RNA polymerase II factors TFIIA and TFIIF and plays a crucial role in the transition from closed to open pre-initiation complexes 1. The protein interacts with various transcriptional regulators, including ZNF297B, which may modulate its transcriptional activity 2. BDP1 is clinically significant as mutations cause autosomal recessive deafness (DFNB112). A specific mutation disrupting the termination codon and extending the protein by 11 residues has been identified in a Qatari family with hereditary hearing loss 3. Expression studies in mouse inner ear show Bdp1 localization in endothelial cells of the stria vascularis and mesenchyme-derived cells surrounding the cochlear duct 3. Additionally, BDP1 has potential as a biomarker in serous ovarian cancer, where altered expression correlates with disease stages and patient survival outcomes 4. The gene demonstrates significant genetic heterogeneity across populations, with different variants contributing to hearing impairment pathogenesis 5.

Sources cited
1
BDP1 is a TFIIIB subunit essential for RNA polymerase III transcription and pre-initiation complex formation
PMID: 28743884
2
BDP1 interacts with zinc finger protein ZNF297B, suggesting transcriptional regulation
PMID: 16542149
3
BDP1 mutations cause hereditary hearing loss and protein is expressed in mouse inner ear structures
PMID: 24312468
4
BDP1 expression levels correlate with serous ovarian cancer stages and patient survival
PMID: 36305848
5
BDP1 variants contribute to hearing impairment with genetic heterogeneity across populations
PMID: 40371963
Disease Associationsβ“˜1
Deafness, autosomal recessive, 112UniProt
Pathogenic Variants3
NM_018429.3(BDP1):c.5743del (p.Ser1915fs)Likely pathogenic
Hearing loss, autosomal recessive 112
β˜…β˜†β˜†β˜†2026β†’ Residue 1915
NM_018429.3(BDP1):c.7254_7258delinsAATATCAT (p.Gly2419_Gln2420delinsIleSerTer)Likely pathogenic
Hearing loss, autosomal recessive 112
β˜…β˜†β˜†β˜†2026β†’ Residue 2419
NM_018429.3(BDP1):c.1714G>T (p.Val572Phe)Likely pathogenic
Deafness
β˜†β˜†β˜†β˜†2019β†’ Residue 572
View on ClinVar β†—
Related Genes
GTF3AProtein interaction100%BRF1Protein interaction100%GTF3C1Protein interaction100%GTF3C2Protein interaction100%GTF3C5Protein interaction100%GTF3C4Protein interaction100%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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BDP1GTF3ABRF1GTF3C1GTF3C2GTF3C5GTF3C4
PROTEIN STRUCTURE
Preparing viewer…
PDB5N9G Β· 2.70 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.68LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.59 [0.51–0.68]
RankingsWhere BDP1 stands among ~20K protein-coding genes
  • #10,279of 20,598
    Most Researched39
  • #4,088of 5,498
    Most Pathogenic Variants3
  • #5,108of 17,882
    Most Constrained (LOEUF)0.68
Genes detectedBDP1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.
PMID: 28743884
Nat Commun Β· 2017
1.00
2
BDP1 as a biomarker in serous ovarian cancer.
PMID: 36305848
Cancer Med Β· 2023
0.90
3
The zinc finger protein ZNF297B interacts with BDP1, a subunit of TFIIIB.
PMID: 16542149
Biol Chem Β· 2006
0.80
4
The Diverse Genetic Landscape of Hearing Impairment in South African Families.
PMID: 40371963
Clin Genet Β· 2025
0.70
5
Consanguinity and hereditary hearing loss in Qatar.
PMID: 25060281
Hum Hered Β· 2014
0.60