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9 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CAPZA3
capping actin protein of muscle Z-line subunit alpha 3
Chromosome 12 · 12p12.3
NCBI Gene: 93661Ensembl: ENSG00000177938.5HGNC: HGNC:24205UniProt: A0A140VKF6
12PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleusactin cytoskeleton organizationbarbed-end actin filament cappingF-actin capping protein complexovarian neoplasmpersonality disorderHydrocephalusinherited hemoglobinopathy
✦AI Summary

CAPZA3 encodes an F-actin capping protein that binds to the barbed (fast-growing) ends of actin filaments in a calcium-independent manner, blocking subunit exchange without severing filaments [UniProt]. The protein localizes to the actin cytoskeleton and plays critical roles in spermatogenesis and cellular DNA repair. In male fertility, CAPZA3 is essential for spermatid morphogenesis and spermiogenesis. It shares a bidirectional promoter with PLCζ (phospholipase C zeta), and coordinated expression of both genes correlates with fertilization success 1. CAPZA3 expression is significantly downregulated in cryptorchid testes, where it emerges as a hub gene linked to progressive loss of spermatogenesis with disease duration 2. The protein's role in actin polymerization during spermatogenesis is supported by observations that CAPZA3 transcript levels increase during postmeiotic germ cell development 3. Beyond reproduction, CAPZA3 functions in homology-directed DNA repair (HDR) within cancer cells. CAPZA3 inactivation impairs HDR capacity, increasing sensitivity to radiation and chemotherapy while paradoxically promoting resistance to CD8 T cell killing through STING pathway activation 4. CAPZA3 expression correlates with immune pathway activation and CD8 T cell infiltration in tumors 4. These findings identify CAPZA3 as a modulator of therapeutic responses in cancer immunotherapy and radiation treatment 5.

Sources cited
1
CAPZA3 is significantly downregulated in cryptorchid testes and identified as a hub gene linked to declining spermatogenesis with disease progression
PMID: 38027210
2
CAPZA3 shares a bidirectional promoter with PLCζ gene, raising implications for understanding male infertility
PMID: 26700242
3
CAPZA3 inactivation impairs homology-directed DNA repair and modulates responses to radiation and immunotherapy in cancer cells
PMID: 38293095
4
CAPZA3 expression correlates with PLCζ and fertilization rates; parallel low expression may indicate genetic defects in their shared bidirectional promoter
PMID: 27114798
5
CAPZA3 is a neighbor gene to Plcz1 whose altered expression affects spermatogenesis during genetic studies
PMID: 35239501
6
CAPZA3 expression correlates with immune cell infiltration and immunotherapy response in esophageal squamous cell carcinoma
PMID: 38305770
7
CAPZA3 transcript levels are elevated during postmeiotic germ cell development in response to androgen receptor signaling
PMID: 23160479
Disease Associationsⓘ20
ovarian neoplasmOpen Targets
0.21Weak
personality disorderOpen Targets
0.16Weak
HydrocephalusOpen Targets
0.16Weak
inherited hemoglobinopathyOpen Targets
0.15Weak
Escherichia coli InfectionsOpen Targets
0.13Weak
jaw diseaseOpen Targets
0.13Weak
stomach diseaseOpen Targets
0.13Weak
azoospermiaOpen Targets
0.11Weak
partial chromosome Y deletionOpen Targets
0.08Suggestive
spermatogenic failure 65Open Targets
0.07Suggestive
spermatogenic failure 84Open Targets
0.07Suggestive
spermatogenic failure 93Open Targets
0.07Suggestive
spermatogenic failure 56Open Targets
0.07Suggestive
spermatogenic failure 92Open Targets
0.07Suggestive
spermatogenic failure 94Open Targets
0.07Suggestive
spermatogenic failure, X-linked, 3Open Targets
0.07Suggestive
spermatogenic failure 40Open Targets
0.07Suggestive
spermatogenic failure 10Open Targets
0.07Suggestive
spermatogenic failure 11Open Targets
0.07Suggestive
spermatogenic failure 80Open Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MTPNProtein interaction96%TMOD4Protein interaction92%CAPZBProtein interaction82%CAPZA2Protein interaction76%CAPZA1Protein interaction72%SPTA1Shared pathway50%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
4%
Brain
0%
Ovary
0%
Heart
0%
Lung
0%
Gene Interaction Network
Click a node to explore
CAPZA3MTPNTMOD4CAPZBCAPZA2CAPZA1SPTA1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q96KX2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.31LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.92 [0.65–1.31]
RankingsWhere CAPZA3 stands among ~20K protein-coding genes
  • #16,407of 20,598
    Most Researched12
  • #13,782of 17,882
    Most Constrained (LOEUF)1.31
Genes detectedCAPZA3
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
RNA sequencing profiles reveals progressively reduced spermatogenesis with progression in adult cryptorchidism.
PMID: 38027210
Front Endocrinol (Lausanne) · 2023
1.00
2
Phospholipase C zeta (PLCζ) and male infertility: Clinical update and topical developments.
PMID: 26700242
Adv Biol Regul · 2016
0.89
3
Genome scale CRISPR screens identify actin capping proteins as key modulators of therapeutic responses to radiation and immunotherapy.
PMID: 38293095
bioRxiv · 2024
0.78
4
Diagnosis of genetic defects through parallel assessment of PLCζ and CAPZA3 in infertile men with history of failed oocyte activation.
PMID: 27114798
Iran J Basic Med Sci · 2016
0.67
5
SPERM FACTORS AND EGG ACTIVATION: The phenotype of PLCZ1-deficient mice.
PMID: 35239501
Reproduction · 2022
0.56