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GeneE
2 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CCNYL1
cyclin Y like 1
Chromosome 2 Β· 2q33.3
NCBI Gene: 151195Ensembl: ENSG00000163249.14HGNC: HGNC:26868UniProt: Q8N7R7
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingplasma membranecyclin-dependent protein serine/threonine kinase activator activityregulation of canonical Wnt signaling pathwayhypertensionpernicious anemiaessential hypertensionazoospermia
✦AI Summary

Based on limited published evidence, CCNYL1 is a key regulator of Wnt signaling implicated in male fertility, embryonic neurogenesis, and cortex development. It activates cyclin-dependent kinase CDK16 and promotes sperm maturation and flagellated sperm motility. A genome-wide association study identified CCNYL1 as a thyroid-dysgenesis risk locus at 2q33.3, with increased thyroidal expression associated with perturbed Wnt signaling in thyroid development 1. Additionally, CCNYL1 was identified as a causal factor in histone deacetylase inhibitor-induced cell death in cancer models 2.

Sources cited
1
CCNYL1 is a thyroid-dysgenesis risk locus involved in Wnt signaling regulation; increased expression is associated with thyroid aplasia and ectopia
PMID: 35535691
2
CCNYL1 identified as a causal gene in histone deacetylase inhibitor-induced cell death pathways in cancer cells
PMID: 40945274
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
hypertensionOpen Targets
0.29Weak
pernicious anemiaOpen Targets
0.28Weak
essential hypertensionOpen Targets
0.28Weak
azoospermiaOpen Targets
0.11Weak
spermatogenic failure 72Open Targets
0.07Suggestive
spermatogenic failure, X-linked, 5Open Targets
0.07Suggestive
spermatogenic failure 18Open Targets
0.07Suggestive
spermatogenic failure 27Open Targets
0.07Suggestive
spermatogenic failure 46Open Targets
0.07Suggestive
spermatogenic failure 19Open Targets
0.07Suggestive
spermatogenic failure 43Open Targets
0.07Suggestive
spermatogenic failure 45Open Targets
0.07Suggestive
spermatogenic failure 49Open Targets
0.07Suggestive
spermatogenic failure 82Open Targets
0.07Suggestive
spermatogenic failure 65Open Targets
0.07Suggestive
spermatogenic failure 83Open Targets
0.07Suggestive
spermatogenic failure 84Open Targets
0.07Suggestive
spermatogenic failure 93Open Targets
0.07Suggestive
spermatogenic failure 92Open Targets
0.07Suggestive
spermatogenic failure 94Open Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
CDK16Protein interaction96%CCNYProtein interaction76%CABS1Shared pathway67%TMEM232Shared pathway67%CATSPERHShared pathway50%CATSPERQShared pathway50%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
100%
Lung
78%
Heart
70%
Brain
43%
Ovary
32%
Gene Interaction Network
Click a node to explore
CCNYL1CDK16CCNYCABS1TMEM232CATSPERHCATSPERQ
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q8N7R7
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.51Moderately Constrained
pLIβ“˜
0.97Intolerant
Observed/Expected LoF0.26 [0.14–0.51]
RankingsWhere CCNYL1 stands among ~20K protein-coding genes
  • #12,954of 20,598
    Most Researched25
  • #3,151of 17,882
    Most Constrained (LOEUF)0.51 Β· top quartile
Genes detectedCCNYL1
Sources retrieved2 papers
Response timeβ€”
πŸ“„ Sources
2
1
Insights into histone deacetylase inhibitors-induced cell death in cancer cell lines.
PMID: 40945274
Biomed Pharmacother Β· 2025
1.00
2
GWAS of thyroid dysgenesis identifies a risk locus at 2q33.3 linked to regulation of Wnt signaling.
PMID: 35535691
Hum Mol Genet Β· 2022
0.50