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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CD2BP2
CD2 cytoplasmic tail binding protein 2
Chromosome 16 · 16p11.2
NCBI Gene: 10421Ensembl: ENSG00000169217.10HGNC: HGNC:1656UniProt: A0A024QZC1
134PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
U4/U6 x U5 tri-snRNP complexnuclear speckprotein bindingribonucleoprotein complex bindingneurodegenerative diseasedengue diseasebreast cancerneoplasm
✦AI Summary

CD2BP2 (CD2 cytoplasmic tail binding protein 2) is a multifunctional RNA-binding protein that serves critical roles in pre-mRNA splicing and miRNA regulation. As a core component of the U5 small nuclear ribonucleoprotein (snRNP) complex, CD2BP2 is essential for spliceosome assembly and function 12. The protein is specifically found in the 20S U5 snRNP precursor but is absent from the mature U4/U6.U5 tri-snRNP, indicating its role in facilitating tri-snRNP assembly through mutually exclusive interfaces 2. Beyond splicing, CD2BP2 regulates microRNA stability and function by controlling miRISC (miRNA-induced silencing complex) components, physically interacting with key proteins like AGO2 and affecting miRNA abundance 3. The protein also functions in stem cell regulation, controlling proliferation versus differentiation decisions in the germline through interactions with splicing factors like U2AF65 4. CD2BP2 contains a GYF domain that recognizes proline-rich sequences, enabling interactions with diverse cellular proteins 5. In disease contexts, CD2BP2 has been implicated in cancer progression, with altered expression patterns observed in pancreatic cancer 6. These findings establish CD2BP2 as a crucial regulator of RNA processing with broad implications for cellular homeostasis and disease.

Sources cited
1
CD2BP2 functions as a chaperone in U5 snRNP biogenesis and recycling, involved in architectural rearrangements
PMID: 38467876
2
CD2BP2 is a hallmark protein of the 20S U5 snRNP precursor, absent from mature tri-snRNP, facilitating tri-snRNP assembly
PMID: 38467877
3
CD2BP2 regulates miRNA stability by controlling miRISC components and physically interacts with AGO2
PMID: 28180320
4
CD2BP2 regulates stem cell proliferation and differentiation decisions, interacting with U2AF65 splicing factor
PMID: 22275078
5
CD2BP2 contains a GYF domain that recognizes proline-rich sequences in various cellular proteins
PMID: 16000308
6
CD2BP2 is involved in pancreatic cancer with altered expression patterns in cancer tissues
PMID: 41003647
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.51Moderate
dengue diseaseOpen Targets
0.37Weak
breast cancerOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.03Suggestive
cancerOpen Targets
0.02Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.01Suggestive
Miyoshi myopathyOpen Targets
0.01Suggestive
lymphopeniaOpen Targets
0.01Suggestive
myelodysplastic syndromeOpen Targets
0.01Suggestive
infectionOpen Targets
0.00Suggestive
chronic kidney diseaseOpen Targets
0.00Suggestive
bladder transitional cell carcinomaOpen Targets
0.00Suggestive
hepatitis B virus infectionOpen Targets
0.00Suggestive
Alzheimer diseaseOpen Targets
0.00Suggestive
AutoimmunityOpen Targets
0.00Suggestive
leukemiaOpen Targets
0.00Suggestive
diabetes mellitusOpen Targets
0.00Suggestive
autismOpen Targets
0.00Suggestive
esophageal squamous cell carcinomaOpen Targets
0.00Suggestive
kidney failureOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PRPF3Protein interaction100%SNRPGProtein interaction100%PRPF8Protein interaction100%EFTUD2Protein interaction100%SNRPD1Protein interaction100%SNRPD2Protein interaction100%
Tissue Expression6 tissues
Brain
100%
Lung
98%
Ovary
87%
Heart
82%
Bone Marrow
62%
Liver
60%
Gene Interaction Network
Click a node to explore
CD2BP2PRPF3SNRPGPRPF8EFTUD2SNRPD1SNRPD2
PROTEIN STRUCTURE
Preparing viewer…
PDB1SYX · 2.34 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.99LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.72 [0.53–0.99]
RankingsWhere CD2BP2 stands among ~20K protein-coding genes
  • #3,448of 20,598
    Most Researched134 · top quartile
  • #9,548of 17,882
    Most Constrained (LOEUF)0.99
Genes detectedCD2BP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
N4-Acetylcytidine-Mediated CD2BP2-DT Drives YBX1 Phase Separation to Stabilize CDK1 and Promote Breast Cancer Progression.
PMID: 39976088
Adv Sci (Weinh) · 2025
1.00
2
TEG-1 CD2BP2 controls miRNA levels by regulating miRISC stability in C. elegans and human cells.
PMID: 28180320
Nucleic Acids Res · 2017
0.90
3
Structural basis of human U5 snRNP late biogenesis and recycling.
PMID: 38467876
Nat Struct Mol Biol · 2024
0.80
4
Investigating the functional role of CD2BP2 in T cells.
PMID: 17906334
Int Immunol · 2007
0.70
5
TEG-1 CD2BP2 regulates stem cell proliferation and sex determination in the C. elegans germ line and physically interacts with the UAF-1 U2AF65 splicing factor.
PMID: 22275078
Dev Dyn · 2012
0.60