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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CD79A
CD79a molecule
Chromosome 19 · 19q13.2
NCBI Gene: 973Ensembl: ENSG00000105369.10HGNC: HGNC:1698UniProt: P11912
90PubMed Papers
21Diseases
0Drugs
8Pathogenic Variants
FUNCTIONAL ROLE
Receptor
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
plasma membraneidentical protein bindingIgM B cell receptor complexB cell receptor complexisolated agammaglobulinemiaagammaglobulinemiadiffuse large B-cell lymphomaautosomal agammaglobulinemia
✦AI Summary

CD79A is an essential component of the B-cell antigen receptor (BCR) complex that initiates signal transduction cascades upon antigen binding 1. Working cooperatively with CD79B, CD79A is required for BCR surface expression, internalization, trafficking to late endosomes, and antigen presentation [UniProt]. The protein stimulates SYK autophosphorylation and binds BLNK, facilitating SYK-mediated phosphorylation and B-cell activation [UniProt]. CD79A serves as a critical B-cell marker in immunohistochemistry, particularly useful for diagnosing B-cell neoplasms and precursor B-acute lymphoblastic leukemia when other markers like CD20 are absent 2. In disease, CD79A mutations are frequently detected in activated B-cell-like (ABC) diffuse large B-cell lymphoma (DLBCL), occurring in approximately 18% of cases 1. These mutations in the ITAM signaling modules increase surface BCR expression and attenuate negative feedback inhibition, promoting chr19 active BCR signaling essential for ABC DLBCL survival 1. This dependency on BCR signaling in ABC DLBCL makes CD79A/CD79B-targeted therapies clinically significant 3. Additionally, CD79B surface expression levels—regulated by KLHL6-mediated degradation—determine sensitivity to polatuzumab vedotin, a CD79B-targeting antibody-drug conjugate approved for first-line DLBCL therapy 4. Germline CD79A mutations cause autosomal recessive agammaglobulinemia [UniProt], highlighting its critical developmental role in B-cell differentiation.

Sources cited
1
CD79A somatic mutations in ITAM modules are frequently detected in ABC DLBCL and enhance BCR signaling; BCR components including CD79A are essential for ABC DLBCL survival
PMID: 20054396
2
CD79A is a useful B-cell marker in immunohistochemistry for diagnosing B-cell neoplasms and precursor B-ALL, with expression patterns useful for differential diagnosis
PMID: 11396639
3
ABC DLBCL tumors have BCR mutations targeting CD79 pathway, establishing BCR signaling dependency and rationale for targeted therapy
PMID: 26193343
4
CD79B surface expression levels regulated by KLHL6 determine sensitivity to polatuzumab vedotin; N-linked glycosylation of CD79B affects epitope availability
PMID: 38683128
5
CD79B is target of polatuzumab vedotin, an antibody-drug conjugate approved for first-line DLBCL therapy
PMID: 39228298
Disease Associationsⓘ21
isolated agammaglobulinemiaOpen Targets
0.65Moderate
agammaglobulinemiaOpen Targets
0.47Moderate
diffuse large B-cell lymphomaOpen Targets
0.38Weak
autosomal agammaglobulinemiaOpen Targets
0.37Weak
colorectal adenocarcinomaOpen Targets
0.37Weak
cutaneous melanomaOpen Targets
0.37Weak
gliomatosis cerebriOpen Targets
0.37Weak
immunodeficiency diseaseOpen Targets
0.34Weak
multiple myelomaOpen Targets
0.31Weak
chronic lymphocytic leukemiaOpen Targets
0.30Weak
esophageal squamous cell carcinomaOpen Targets
0.30Weak
esophageal adenocarcinomaOpen Targets
0.29Weak
lung adenocarcinomaOpen Targets
0.29Weak
head and neck squamous cell carcinomaOpen Targets
0.28Weak
gastric carcinomaOpen Targets
0.28Weak
gastric adenocarcinomaOpen Targets
0.28Weak
lymphoplasmacytic lymphomaOpen Targets
0.28Weak
rectal adenocarcinomaOpen Targets
0.28Weak
colon adenocarcinomaOpen Targets
0.28Weak
urinary bladder carcinomaOpen Targets
0.28Weak
Agammaglobulinemia 3, autosomal recessiveUniProt
Pathogenic Variants8
NM_001783.4(CD79A):c.67_73del (p.Ala23fs)Pathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2025→ Residue 23
NM_001783.4(CD79A):c.465C>A (p.Cys155Ter)Pathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2025→ Residue 155
NM_001783.4(CD79A):c.379+1G>ALikely pathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2023
NM_001783.4(CD79A):c.499-1G>ALikely pathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2022
NC_000019.10:g.41878996_41879009delPathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2022
NM_001783.4(CD79A):c.323T>G (p.Val108Gly)Pathogenic
Inherited Immunodeficiency Diseases
★☆☆☆2019→ Residue 108
NM_001783.4(CD79A):c.198G>A (p.Trp66Ter)Pathogenic
Agammaglobulinemia 3, autosomal recessive
★☆☆☆2018→ Residue 66
NM_001783.4(CD79A):c.380-2A>GPathogenic
Agammaglobulinemia 3, autosomal recessive
☆☆☆☆1999
View on ClinVar ↗
Related Genes
MZB1Protein interaction100%IGLL1Protein interaction100%CD2Protein interaction100%VPREB1Protein interaction99%BLKProtein interaction99%CD72Protein interaction99%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
35%
Liver
9%
Ovary
3%
Heart
2%
Brain
2%
Gene Interaction Network
Click a node to explore
CD79AMZB1IGLL1CD2VPREB1BLKCD72
PROTEIN STRUCTURE
Preparing viewer…
PDB7WSO · 3.03 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.99LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.63 [0.42–0.99]
RankingsWhere CD79A stands among ~20K protein-coding genes
  • #5,291of 20,598
    Most Researched90
  • #3,059of 5,498
    Most Pathogenic Variants8
  • #9,514of 17,882
    Most Constrained (LOEUF)0.99
Genes detectedCD79A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Chronic active B-cell-receptor signalling in diffuse large B-cell lymphoma.
PMID: 20054396
Nature · 2010
1.00
2
Diffuse large B-cell lymphoma: 2019 update on diagnosis, risk stratification, and treatment.
PMID: 30859597
Am J Hematol · 2019
0.90
3
Inhibition of B Cell Receptor Signaling by Ibrutinib in Primary CNS Lymphoma.
PMID: 28552327
Cancer Cell · 2017
0.80
4
CD79: a review.
PMID: 11396639
Appl Immunohistochem Mol Morphol · 2001
0.70
5
Targeting B cell receptor signaling with ibrutinib in diffuse large B cell lymphoma.
PMID: 26193343
Nat Med · 2015
0.60