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50 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CDKN1A
cyclin dependent kinase inhibitor 1A
Chromosome 6 · 6p21.2
NCBI Gene: 1026Ensembl: ENSG00000124762.16HGNC: HGNC:1784UniProt: P38936
1,844PubMed Papers
20Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
RESEARCH IMPACT
Highly Studied
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
negative regulation of DNA biosynthetic processregulation of G1/S transition of mitotic cell cyclemitotic G1 DNA damage checkpoint signalingnegative regulation of vascular associated smooth muscle cell proliferationurinary bladder cancerneurodegenerative diseaseatrial fibrillationheart failure
✦AI Summary

CDKN1A (p21) is a cyclin-dependent kinase inhibitor functioning as a critical cell cycle checkpoint regulator and tumor suppressor. Primarily, CDKN1A inhibits CDK4/6 and other cyclin-dependent kinases, blocking phosphorylation of key substrates like RB1 and preventing cell cycle progression through G1/S and G2 phases 1. The gene is directly transcriptionally activated by p53 in response to DNA damage, mediating p53-dependent growth suppression 1. CDKN1A also suppresses DNA synthesis by competing with PCNA-binding partners. Beyond cell cycle control, CDKN1A regulates cellular senescence; RIG-I stabilizes CDKN1A mRNA in aging stem cells, promoting senescence through elevated p21 protein 2. In ovarian aging, FOXP1 declines with age and reciprocally inhibits CDKN1A transcription, suggesting CDKN1A upregulation contributes to oocyte aging 3. Clinically, CDKN1A alterations associate with cancer susceptibility. Genetic polymorphisms (rs1801270) show significant associations with colorectal cancer risk, with AC genotypes potentially protective 4. In gastric adenocarcinomas, CDKN1A exhibits complex epigenetic regulation via histone acetylation, with implications for histone deacetylase inhibitor therapy 5. CDKN1A also promotes cisplatin-induced acute kidney injury through ferroptosis and ROS production 6, and accumulates dose- and LET-dependently after radiation exposure, indicating its role in DNA damage response 7.

Sources cited
1
CDKN1A (WAF1) is directly induced by p53 and suppresses tumor cell growth
PMID: 8242752
2
RIG-I stabilizes CDKN1A mRNA to drive cellular senescence in aging stem cells
PMID: 40133712
3
FOXP1 decline with age inhibits CDKN1A transcription in ovarian aging
PMID: 38594460
4
CDKN1A rs1801270 polymorphisms associate with colorectal cancer susceptibility
PMID: 36691945
5
CDKN1A shows complex histone acetylation patterns in gastric adenocarcinomas
PMID: 26567008
6
CDKN1A promotes cisplatin-induced acute kidney injury through ferroptosis and ROS
PMID: 39353481
7
CDKN1A accumulates dose- and LET-dependently after radiation exposure
PMID: 15161352
Disease Associationsⓘ20
urinary bladder cancerOpen Targets
0.59Moderate
neurodegenerative diseaseOpen Targets
0.58Moderate
atrial fibrillationOpen Targets
0.56Moderate
heart failureOpen Targets
0.55Moderate
Alzheimer diseaseOpen Targets
0.55Moderate
Parkinson diseaseOpen Targets
0.54Moderate
multiple sclerosisOpen Targets
0.53Moderate
lysosomal storage diseaseOpen Targets
0.53Moderate
hypertrophic cardiomyopathyOpen Targets
0.52Moderate
congestive heart failureOpen Targets
0.52Moderate
cardiomyopathyOpen Targets
0.51Moderate
coronary artery diseaseOpen Targets
0.50Moderate
atrial flutterOpen Targets
0.49Moderate
Abdominal Aortic AneurysmOpen Targets
0.49Moderate
breast carcinomaOpen Targets
0.48Moderate
coronary atherosclerosisOpen Targets
0.47Moderate
aortic aneurysmOpen Targets
0.46Moderate
Uterine leiomyomaOpen Targets
0.44Moderate
Paroxysmal ventricular tachycardiaOpen Targets
0.43Moderate
cardiovascular diseaseOpen Targets
0.43Moderate
Pathogenic Variants1
NM_000389.5(CDKN1A):c.142C>T (p.Arg48Ter)Pathogenic
Malignant tumor of urinary bladder|Neoplasm
☆☆☆☆→ Residue 48
View on ClinVar ↗
Related Genes
CCND1Protein interaction100%RUNX3Protein interaction100%CCND2Protein interaction100%CCND3Protein interaction100%CDK3Protein interaction100%CDK5Protein interaction100%
Tissue Expression6 tissues
Ovary
100%
Lung
100%
Liver
60%
Brain
30%
Bone Marrow
24%
Heart
24%
Gene Interaction Network
Click a node to explore
CDKN1ACCND1RUNX3CCND2CCND3CDK3CDK5
PROTEIN STRUCTURE
Preparing viewer…
PDB5E0U · 1.93 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.49LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.96 [0.63–1.49]
RankingsWhere CDKN1A stands among ~20K protein-coding genes
  • #62of 20,598
    Most Researched1,844 · top 1%
  • #4,595of 5,498
    Most Pathogenic Variants1
  • #15,129of 17,882
    Most Constrained (LOEUF)1.49
Genes detectedCDKN1A
Sources retrieved50 papers
Response time—
📄 Sources
50â–¼
1
Spatiotemporal transcriptomic changes of human ovarian aging and the regulatory role of FOXP1.
PMID: 38594460
Nat Aging · 2024
1.00
2
WAF1, a potential mediator of p53 tumor suppression.
PMID: 8242752
Cell · 1993
0.90
3
Clinical significance and functions of microRNA-93/CDKN1A axis in human cervical cancer.
PMID: 30098344
Life Sci · 2018
0.86
4
The novel roles of virus infection-associated gene CDKN1A in chemoresistance and immune infiltration of glioblastoma.
PMID: 33621203
Aging (Albany NY) · 2021
0.82
5
Association between CDKN1A Ser31Arg and C20T gene polymorphisms and colorectal cancer risk and prognosis.
PMID: 20363991
In Vivo · 2010
0.80