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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CENPB
centromere protein B
Chromosome 20 · 20p13
NCBI Gene: 1059Ensembl: ENSG00000125817.8HGNC: HGNC:1852UniProt: P07199
105PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmchromosomechromosome, centromeric regionnuclear bodysystemic scleroderma46,XX gonadal dysgenesishepatocellular carcinomaprimary ovarian insufficiency
✦AI Summary

CENPB (centromere protein B) is a centromeric DNA-binding protein that specifically binds to a 17 bp sequence called the CENP-B box within alphoid satellite DNA at centromeres 1. The protein is thought to organize centromeric satellite DNA arrays into higher-order structures that may facilitate centromere formation and kinetochore assembly 2. However, genetic studies demonstrate that CENPB is not essential for basic cellular functions, as mice lacking the gene are viable and healthy with normal mitosis, intact centromere-kinetochore complexes, and proper chromosome 20 3. Beyond its structural role at centromeres, CENPB has clinical relevance as both a biomarker and therapeutic target. Antibodies against CENPB are used diagnostically in autoimmune rheumatic diseases 1. In cancer, particularly hepatocellular carcinoma, CENPB is overexpressed and associated with poor prognosis, promoting tumor cell proliferation and invasion 4. The protein's expression is negatively regulated by miR-29a and can be modulated by circular RNAs that stabilize CENPB mRNA 45. While dispensable for normal development, CENPB's dysregulation contributes to cancer progression, making it a potential therapeutic target.

Sources cited
1
CENPB binds to CENP-B box sequences and is a target of clinically relevant antibodies in rheumatic diseases
PMID: 33154583
2
CENPB binds alphoid satellite DNA and may organize centromeric structures
PMID: 8908179
3
CENPB knockout mice are viable with normal mitosis and intact centromere function
PMID: 9933410
4
CENPB is overexpressed in hepatocellular carcinoma, promotes proliferation, and is regulated by miR-29a
PMID: 37925172
5
Circular RNAs can regulate CENPB mRNA stability and affect cancer progression
PMID: 41022764
Disease Associationsⓘ20
systemic sclerodermaOpen Targets
0.08Suggestive
46,XX gonadal dysgenesisOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
primary ovarian insufficiencyOpen Targets
0.08Suggestive
autism spectrum disorder - epilepsy - arthrogryposis syndromeOpen Targets
0.08Suggestive
azoospermiaOpen Targets
0.08Suggestive
Testicular regression syndromeOpen Targets
0.07Suggestive
squamous cell intraepithelial neoplasiaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
systemic lupus erythematosusOpen Targets
0.06Suggestive
partial chromosome Y deletionOpen Targets
0.06Suggestive
Perrault syndrome 6Open Targets
0.06Suggestive
46,XY complete gonadal dysgenesisOpen Targets
0.06Suggestive
46,XY sex reversal 11Open Targets
0.06Suggestive
Mayer-Rokitansky-Küster-Hauser syndromeOpen Targets
0.06Suggestive
46,XX testicular disorder of sex developmentOpen Targets
0.06Suggestive
premature ovarian failure 7Open Targets
0.06Suggestive
spermatogenic failure, X-linked, 2Open Targets
0.06Suggestive
Double uterus - hemivagina - renal agenesisOpen Targets
0.06Suggestive
double uterus-hemivagina-renal agenesis syndromeOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RO60Protein interaction100%CENPFProtein interaction100%CENPNProtein interaction100%CENPWProtein interaction100%KIF2CProtein interaction99%AURKBProtein interaction98%
Tissue Expression6 tissues
Brain
100%
Lung
85%
Liver
78%
Ovary
78%
Heart
75%
Bone Marrow
33%
Gene Interaction Network
Click a node to explore
CENPBRO60CENPFCENPNCENPWKIF2CAURKB
PROTEIN STRUCTURE
Preparing viewer…
PDB1UFI · 1.65 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.83LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.56 [0.39–0.83]
RankingsWhere CENPB stands among ~20K protein-coding genes
  • #4,517of 20,598
    Most Researched105 · top quartile
  • #7,052of 17,882
    Most Constrained (LOEUF)0.83
Genes detectedCENPB
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Understanding and interpreting antinuclear antibody tests in systemic rheumatic diseases.
PMID: 33154583
Nat Rev Rheumatol · 2020
1.00
2
Chromosome-specific centromeric patterns define the centeny map of the human genome.
PMID: 40608920
Science · 2025
0.90
3
Centromeres drive and take a break.
PMID: 40759764
Chromosome Res · 2025
0.80
4
CENPB promotes the proliferation of hepatocellular carcinoma and is directly regulated by miR-29a.
PMID: 37925172
Aging (Albany NY) · 2023
0.70
5
Direct circMAN1A2(2,3,4,5)-CENPB mRNA interaction regulates cell proliferation and cancer progression.
PMID: 41022764
Nat Commun · 2025
0.60