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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CES3
carboxylesterase 3
Chromosome 16 · 16q22.1
NCBI Gene: 23491Ensembl: ENSG00000172828.13HGNC: HGNC:1865UniProt: A0A0C4DFY7
24PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingextracellular exosomecarboxylesterase activitycytosolneurodegenerative diseasehypothyroidismatrial fibrillationSjogren syndrome
✦AI Summary

CES3 (carboxylesterase 3) is a phase I drug metabolizing enzyme that catalyzes the hydrolysis of ester, amide, and carbamate compounds 1. The protein is primarily expressed in liver and localizes to the endoplasmic reticulum, with tissue-specific expression also found in gastrointestinal tract, lungs, and brain regions including cerebellum 123. CES3 demonstrates relatively low catalytic efficiency compared to other carboxylesterases, showing poor substrate conversion for the anticancer prodrug CPT-11 (irinotecan) to its active metabolite SN-38 41. Beyond xenobiotic metabolism, CES3 plays crucial roles in lipid metabolism and metabolic regulation. It promotes lipid storage in adipocytes and is essential for β-adrenergic signaling-stimulated thermogenesis and lipolysis in adipose tissue 56. In liver, CES3 contributes to metabolic dysfunction-associated steatotic liver disease (MASLD) development by promoting de novo lipogenesis, with CES3 loss protecting against Western diet-induced hepatic steatosis 2. CES3 expression is downregulated in various cancers including hepatocellular carcinoma and colorectal adenocarcinoma, where higher expression correlates with better prognosis and enhanced immunotherapy response 78. The enzyme represents a potential therapeutic target for metabolic disorders and cancer treatment.

Sources cited
1
CES3 is a phase I drug metabolizing enzyme that hydrolyzes esters, amides, and carbamates with tissue-specific expression in GI tract, lungs, and liver
PMID: 19508181
2
CES3 has low catalytic efficiency for CPT-11 hydrolysis compared to other carboxylesterases
PMID: 15100172
3
CES3 is expressed in liver, localizes to ER, and contributes to MASLD development through lipogenesis regulation
PMID: 40865609
4
CES3 transcripts are found in specific brain regions including cerebellum and may detoxify xenobiotics in neural tissues
PMID: 20422440
5
CES3 promotes lipid storage in adipocytes and is a target for obesity-diabetes treatment
PMID: 24362705
6
CES3 is essential for β-adrenergic signaling-stimulated thermogenesis and lipolysis in adipose tissue
PMID: 30862682
7
CES3 is downregulated in hepatocellular carcinoma and associated with poor prognosis
PMID: 37215979
8
CES3 is downregulated in colorectal adenocarcinoma with higher expression correlating to better immunotherapy response
PMID: 37480527
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.22Weak
hypothyroidismOpen Targets
0.20Weak
atrial fibrillationOpen Targets
0.17Weak
Sjogren syndromeOpen Targets
0.10Suggestive
atrial flutterOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.07Suggestive
non-alcoholic fatty liver diseaseOpen Targets
0.04Suggestive
nasopharyngeal carcinomaOpen Targets
0.03Suggestive
obesityOpen Targets
0.03Suggestive
hypertensionOpen Targets
0.02Suggestive
liver cancerOpen Targets
0.02Suggestive
diabetes mellitusOpen Targets
0.02Suggestive
type 2 diabetes mellitusOpen Targets
0.01Suggestive
Townes-Brocks syndromeOpen Targets
0.01Suggestive
atherosclerosisOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
non-alcoholic steatohepatitisOpen Targets
0.01Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
hyperlipidemiaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ESDProtein interaction86%LIPEProtein interaction79%TNFRSF13CProtein interaction74%NAT1Shared pathway50%NAT2Shared pathway50%AOX1Shared pathway50%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
2%
Ovary
2%
Brain
2%
Heart
1%
Lung
1%
Gene Interaction Network
Click a node to explore
CES3ESDLIPETNFRSF13CNAT1NAT2AOX1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q6UWW8
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.99LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.78 [0.62–0.99]
RankingsWhere CES3 stands among ~20K protein-coding genes
  • #13,157of 20,598
    Most Researched24
  • #9,464of 17,882
    Most Constrained (LOEUF)0.99
Genes detectedCES3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Human carboxylesterases: an update on CES1, CES2 and CES3.
PMID: 19508181
Protein Pept Lett · 2009
1.00
2
ACE2 negatively regulates the Warburg effect and suppresses hepatocellular carcinoma progression via reducing ROS-HIF1α activity.
PMID: 37215979
Int J Biol Sci · 2023
0.90
3
Hydrolysis of irinotecan and its oxidative metabolites, 7-ethyl-10-[4-N-(5-aminopentanoic acid)-1-piperidino] carbonyloxycamptothecin and 7-ethyl-10-[4-(1-piperidino)-1-amino]-carbonyloxycamptothecin, by human carboxylesterases CES1A1, CES2, and a newly expressed carboxylesterase isoenzyme, CES3.
PMID: 15100172
Drug Metab Dispos · 2004
0.80
4
A potential novel biomarker: comprehensive analysis of prognostic value and immune implication of CES3 in colonic adenocarcinoma.
PMID: 37480527
J Cancer Res Clin Oncol · 2023
0.70
5
Integrated phenotypic and activity-based profiling links Ces3 to obesity and diabetes.
PMID: 24362705
Nat Chem Biol · 2014
0.60