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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CLIC2
chloride intracellular channel 2
Chromosome X · Xq28
NCBI Gene: 1193Ensembl: ENSG00000155962.14HGNC: HGNC:2063UniProt: O15247
35PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Ion ChannelTransporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytosolplasma membraneregulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulumregulation of cardiac muscle contraction by regulation of the release of sequestered calcium ionneurodegenerative diseaseX-linked intellectual disability-cardiomegaly-congestive heart failure syndromeX-linked intellectual disability - cardiomegaly - congestive heart failurecancer
✦AI Summary

CLIC2 is a multifunctional X-linked protein that exists in both soluble and membrane-bound forms. In its soluble state, CLIC2 catalyzes glutathione-dependent redox reactions and displays glutathione peroxidase activity 1, while maintaining a monomeric structure with an intramolecular disulfide bond regardless of redox conditions 2. Upon membrane insertion—a redox-regulated process—CLIC2 forms pH-dependent chloride channels 2 and modulates ryanodine receptor activity to inhibit calcium influx. CLIC2 plays critical roles in tissue homeostasis and immune regulation. In endothelial cells, CLIC2 associates with tight junction proteins (claudins, occludin, ZO-1) and is essential for maintaining barrier integrity; CLIC2 knockdown permits cancer cell transmigration 3. During monocyte-to-macrophage differentiation, CLIC2 regulates the Stat3 signaling pathway through interaction with Shp1 phosphatase, modulating cytokine secretion and promoting a tumor-permissive microenvironment 4. CLIC2 has disease relevance in multiple contexts. Anti-CLIC2 autoantibodies correlate with systemic lupus erythematosus disease activity (SLEDAI score ≥6) 5, suggesting potential as a biomarker. CLIC2 is implicated in gastric cancer progression 4 and cancer metastasis through effects on endothelial barrier function 3. While CLIC2 was proposed as an X-linked intellectual disability gene, large-scale sequencing studies question this association 6, warranting further replication studies.

Sources cited
1
CLIC2 catalyzes glutathione-dependent redox reactions and possesses glutathione peroxidase activity
PMID: 25581026
2
CLIC2 structure, monomeric state with intramolecular disulfide, forms pH-dependent chloride channels subject to redox regulation
PMID: 17945253
3
CLIC2 expression in endothelial cells correlates with tight junction proteins; CLIC2 knockdown permits cancer cell transmigration through endothelial monolayers
PMID: 30929599
4
CLIC2 regulates monocyte-to-macrophage differentiation via Stat3 signaling pathway interaction with Shp1 phosphatase, modulating cytokine secretion and tumor microenvironment
PMID: 40696397
5
Anti-CLIC2 autoantibodies are elevated in systemic lupus erythematosus patients and associate with higher disease activity (SLEDAI score)
PMID: 28862243
6
CLIC2 is highlighted as a gene requiring replication studies regarding X-linked intellectual disability association
PMID: 23871722
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.47Moderate
X-linked intellectual disability-cardiomegaly-congestive heart failure syndromeOpen Targets
0.41Moderate
X-linked intellectual disability - cardiomegaly - congestive heart failureOpen Targets
0.37Weak
cancerOpen Targets
0.09Suggestive
breast cancerOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.07Suggestive
sleep apneaOpen Targets
0.06Suggestive
systemic lupus erythematosusOpen Targets
0.05Suggestive
Sleep DisorderOpen Targets
0.04Suggestive
meningiomaOpen Targets
0.03Suggestive
juvenile idiopathic arthritisOpen Targets
0.03Suggestive
head and neck squamous cell carcinomaOpen Targets
0.03Suggestive
Hashimoto's thyroiditisOpen Targets
0.03Suggestive
Parkinson diseaseOpen Targets
0.03Suggestive
gastric cancerOpen Targets
0.03Suggestive
esophageal squamous cell carcinomaOpen Targets
0.02Suggestive
lung carcinomaOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
atrial fibrillationOpen Targets
0.02Suggestive
clear cell renal carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CLIC4Protein interaction86%CLIC5Protein interaction86%MAPK15Protein interaction83%PHC3Protein interaction75%CLIC1Shared pathway50%PACC1Shared pathway40%
Tissue Expression6 tissues
Lung
100%
Heart
82%
Bone Marrow
55%
Ovary
52%
Brain
16%
Liver
11%
Gene Interaction Network
Click a node to explore
CLIC2CLIC4CLIC5MAPK15PHC3CLIC1PACC1
PROTEIN STRUCTURE
Preparing viewer…
PDB2R4V · 1.85 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.06LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.61 [0.37–1.06]
RankingsWhere CLIC2 stands among ~20K protein-coding genes
  • #10,941of 20,598
    Most Researched35
  • #10,631of 17,882
    Most Constrained (LOEUF)1.06
Genes detectedCLIC2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Tilapia and human CLIC2 structures are highly conserved.
PMID: 29198705
Biochem Biophys Res Commun · 2018
1.00
2
CLIC2 regulates immunosuppression and macrophage differentiation in genomically stable gastric cancer.
PMID: 40696397
Biol Direct · 2025
0.90
3
XLID-causing mutations and associated genes challenged in light of data from large-scale human exome sequencing.
PMID: 23871722
Am J Hum Genet · 2013
0.80
4
PMID: 26962617
0.70
5
Association of anti-CLIC2 and anti-HMGB1 autoantibodies with higher disease activity in systemic lupus erythematosus patients.
PMID: 28862243
J Postgrad Med · 2017
0.60