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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
COL6A3
collagen type VI alpha 3 chain
Chromosome 2 Β· 2q37.3
NCBI Gene: 1293Ensembl: ENSG00000163359.18HGNC: HGNC:2213UniProt: B7ZW00
111PubMed Papers
23Diseases
2Drugs
207Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
extracellular matrixextracellular regionextracellular vesicleextracellular exosomeCongenital muscular dystrophy, Ullrich typedystonia 27Bethlem myopathyBethlem myopathy 1C
✦AI Summary

COL6A3 encodes the alpha 3 chain of collagen type VI, which forms trimeric complexes that serve as structural components of the extracellular matrix 1. The protein functions as a cell-binding protein and provides mechanical support while exerting cytoprotective functions including inhibition of apoptosis and oxidative damage 1. COL6A3 plays important roles in muscle organ development and is expressed in disease-relevant tissues including musculoskeletal system 1. Mutations in COL6A3 cause congenital muscular disorders including Ullrich congenital muscular dystrophy, Bethlem myopathy, and myosclerosis myopathy, which present with muscle wasting, weakness, joint contractures, and respiratory compromise 1. COL6A3 variants are among the most common causes of identified muscle disorders in diagnostic sequencing panels 2. Beyond muscle disease, COL6A3 has emerging roles in other pathological processes. The carboxyl terminus product endotrophin mediates obesity's effects on coronary artery disease risk 3. COL6A3 expression is associated with sleep-related traits including chr2 4 and serves as a prognostic biomarker in various cancers including undifferentiated pleomorphic sarcoma 5. In glioblastoma, COL6A3+ tumor-associated fibroblasts contribute to treatment resistance and vascular fibrosis 6.

Sources cited
1
COL6A3 forms collagen VI trimers with mechanical and cytoprotective functions; mutations cause muscular dystrophies
PMID: 36982167
2
COL6A3 variants are among the most common causes of muscle disorders in diagnostic panels
PMID: 31127727
3
COL6A3-derived endotrophin mediates obesity effects on coronary artery disease
PMID: 39856218
4
COL6A3 is associated with chronotype sleep trait
PMID: 38177695
5
COL6A3 serves as prognostic biomarker in undifferentiated pleomorphic sarcoma
PMID: 39548577
6
COL6A3+ fibroblasts contribute to glioblastoma treatment resistance and vascular fibrosis
PMID: 41174767
Disease Associationsβ“˜23
Congenital muscular dystrophy, Ullrich typeOpen Targets
0.77Strong
dystonia 27Open Targets
0.77Strong
Bethlem myopathyOpen Targets
0.76Strong
Bethlem myopathy 1COpen Targets
0.75Strong
Bethlem myopathy 1AOpen Targets
0.72Strong
Ullrich congenital muscular dystrophy 1AOpen Targets
0.70Strong
Ullrich congenital muscular dystrophy 1COpen Targets
0.68Moderate
Ullrich congenital muscular dystrophyOpen Targets
0.68Moderate
Dupuytren ContractureOpen Targets
0.59Moderate
collagen 6-related myopathyOpen Targets
0.58Moderate
Tip-toe gaitOpen Targets
0.50Moderate
genetic disorderOpen Targets
0.47Moderate
Skin ulcerOpen Targets
0.46Moderate
coronary artery diseaseOpen Targets
0.46Moderate
eye diseaseOpen Targets
0.44Moderate
aortic aneurysmOpen Targets
0.43Moderate
ulcer diseaseOpen Targets
0.42Moderate
myopathyOpen Targets
0.40Moderate
Peyronie diseaseOpen Targets
0.38Weak
Penile FibromatosisOpen Targets
0.37Weak
Bethlem myopathy 1CUniProt
Dystonia 27UniProt
Ullrich congenital muscular dystrophy 1CUniProt
Pathogenic Variants207
NM_004369.4(COL6A3):c.7447A>G (p.Lys2483Glu)Pathogenic
not provided|Bethlem myopathy 1A|COL6A3-related disorder|Bethlem myopathy 1C|Ullrich congenital muscular dystrophy 1A|Dystonia 27
β˜…β˜…β˜†β˜†2026β†’ Residue 2483
NM_004369.4(COL6A3):c.6210+1G>APathogenic
not provided|Ullrich congenital muscular dystrophy 1A|Bethlem myopathy 1A|Ullrich congenital muscular dystrophy 1C|Bethlem myopathy 1C|Collagen 6-related myopathy
β˜…β˜…β˜†β˜†2026
NM_004369.4(COL6A3):c.761del (p.Gly254fs)Pathogenic
not provided|Bethlem myopathy 1A|COL6A3-related disorder|Collagen 6-related myopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 254
NM_004369.4(COL6A3):c.6282+1G>APathogenic
not provided|Ullrich congenital muscular dystrophy 1A|Bethlem myopathy 1A|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025
NM_004369.4(COL6A3):c.6930+5G>APathogenic
Ullrich congenital muscular dystrophy 1A|Bethlem myopathy 1A|Ullrich congenital muscular dystrophy 1C
β˜…β˜…β˜†β˜†2025
NM_004369.4(COL6A3):c.5480del (p.Gly1827fs)Pathogenic
not provided|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 1827
NM_004369.4(COL6A3):c.7796_7797del (p.Phe2599fs)Pathogenic
not provided|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 2599
NM_004369.4(COL6A3):c.6460C>T (p.Arg2154Ter)Pathogenic
Ullrich congenital muscular dystrophy 1A|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 2154
NM_004369.4(COL6A3):c.76C>T (p.Gln26Ter)Pathogenic
Bethlem myopathy 1A|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 26
NM_004369.4(COL6A3):c.6604C>T (p.Arg2202Ter)Pathogenic
not provided|Bethlem myopathy 1A|Ullrich congenital muscular dystrophy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 2202
NM_004369.4(COL6A3):c.1393C>T (p.Arg465Ter)Pathogenic
Bethlem myopathy 1A|Ullrich congenital muscular dystrophy 1C
β˜…β˜…β˜†β˜†2025β†’ Residue 465
NM_004369.4(COL6A3):c.6157-2A>CPathogenic
not provided|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025
NM_004369.4(COL6A3):c.526G>T (p.Gly176Ter)Pathogenic
not provided|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 176
NM_004369.4(COL6A3):c.6310-2A>GPathogenic
Bethlem myopathy 1A|not provided|Ullrich congenital muscular dystrophy 1A
β˜…β˜…β˜†β˜†2025
NM_004369.4(COL6A3):c.6181C>T (p.Arg2061Ter)Pathogenic
Myopathy|not provided|Limb-girdle muscular dystrophy
β˜…β˜…β˜†β˜†2025β†’ Residue 2061
NM_004369.4(COL6A3):c.3504dup (p.Asn1169fs)Pathogenic
Bethlem myopathy 1A|Ullrich congenital muscular dystrophy 1A
β˜…β˜…β˜†β˜†2025β†’ Residue 1169
NM_004369.4(COL6A3):c.8966-1G>CPathogenic
Dystonia 27|not provided|Bethlem myopathy 1A
β˜…β˜…β˜†β˜†2025
NM_004369.4(COL6A3):c.2506C>T (p.Arg836Ter)Pathogenic
not provided|Bethlem myopathy 1A|Dystonia 27;Bethlem myopathy 1A;Ullrich congenital muscular dystrophy 1A|Bethlem myopathy 1C;Ullrich congenital muscular dystrophy 1C
β˜…β˜…β˜†β˜†2025β†’ Residue 836
NM_004369.4(COL6A3):c.7094delPathogenic
Bethlem myopathy 1A|Bethlem myopathy 1C
β˜…β˜…β˜†β˜†2024
NM_004369.4(COL6A3):c.6309+1G>APathogenic
Bethlem myopathy 1A|not provided
β˜…β˜…β˜†β˜†2024
View on ClinVar β†—
Drug Targets2
COLLAGENASE CLOSTRIDIUM HISTOLYTICUMApproved
Collagen hydrolytic enzyme
ulcer disease
OCRIPLASMINApproved
Laminin hydrolytic enzyme
Related Genes
ITGA6Protein interaction100%ITGA3Protein interaction98%LUMProtein interaction98%BGNProtein interaction97%SERPINH1Protein interaction97%COL1A2Protein interaction97%
Tissue Expression6 tissues
Ovary
100%
Lung
65%
Heart
38%
Liver
6%
Brain
1%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
COL6A3ITGA6ITGA3LUMBGNSERPINH1COL1A2
PROTEIN STRUCTURE
Preparing viewer…
PDB1KTH Β· 0.95 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.56Moderately Constrained
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.49 [0.42–0.56]
RankingsWhere COL6A3 stands among ~20K protein-coding genes
  • #4,264of 20,598
    Most Researched111 Β· top quartile
  • #592of 1,025
    FDA-Approved Drug Targets2
  • #319of 5,498
    Most Pathogenic Variants207 Β· top 10%
  • #3,678of 17,882
    Most Constrained (LOEUF)0.56 Β· top quartile
Genes detectedCOL6A3
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Collagen VI in the Musculoskeletal System.
PMID: 36982167
Int J Mol Sci Β· 2023
1.00
2
Integrative proteogenomic analysis identifies COL6A3-derived endotrophin as a mediator of the effect of obesity on coronary artery disease.
PMID: 39856218
Nat Genet Β· 2025
0.90
3
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
0.80
4
Exome sequencing identifies genes associated with sleep-related traits.
PMID: 38177695
Nat Hum Behav Β· 2024
0.70
5
Panel-Based Exome Sequencing for Neuromuscular Disorders as a Diagnostic Service.
PMID: 31127727
J Neuromuscul Dis Β· 2019
0.60