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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CPN1
carboxypeptidase N subunit 1
Chromosome 10 Β· 10q24.2
NCBI Gene: 1369Ensembl: ENSG00000120054.13HGNC: HGNC:2312UniProt: P15169
33PubMed Papers
21Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
Protease
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingmetallocarboxypeptidase activityprotein processingpeptide metabolic processneurodegenerative diseasenon-alcoholic fatty liver diseasesialolithiasisobesity
✦AI Summary

CPN1 encodes the catalytic 50-kDa subunit of carboxypeptidase N (CPN), a plasma zinc metalloprotease that functions as a critical regulator of inflammation and vascular homeostasis 1. The enzyme cleaves carboxy-terminal arginines and lysines from bioactive peptides in circulation, including complement anaphylatoxins, kinins, and other vasoactive substances, thereby modulating their activity and receptor binding 1. CPN1 forms part of a 280-kDa tetrameric complex with two regulatory subunits, and the gene is located on chromosome 10 2. The protein plays a protective role by inactivating potent inflammatory mediators that could otherwise cause tissue damage. Disease relevance includes hereditary angioedema with normal C1 inhibitor, where CPN1 gene variants (c.533G>A, c.582A>G, c.734C>T) are associated with reduced CPN activity (30-50% of normal) and clinical symptoms including angioedema and urticaria 3. CPN1 expression begins early in embryonic development (8.5 days post coitus) in erythroid progenitor cells and hepatocytes 4. Clinically, serum CPN1 levels show promise as a biomarker for breast cancer diagnosis and metastasis assessment, demonstrating superior diagnostic ability compared to CA15-3 alone 5. Additionally, dysregulated CPN1 activity contributes to bradykinin accumulation in severe COVID-19 patients 6.

Sources cited
1
CPN1 encodes the catalytic subunit of carboxypeptidase N, a plasma zinc metalloprotease that cleaves C-terminal arginines and lysines from bioactive peptides
PMID: 14687935
2
CPN1 gene is located on chromosome 10 and encodes the 50-kDa catalytic subunit of the 280-kDa tetrameric carboxypeptidase N enzyme
PMID: 9628828
3
CPN1 gene variants are associated with carboxypeptidase N deficiency and hereditary angioedema with normal C1 inhibitor
PMID: 38445235
4
CPN1 expression begins at 8.5 days post coitus during mouse embryonic development in erythroid progenitor cells
PMID: 15177117
5
Serum CPN1 serves as a potential biomarker for breast cancer diagnosis and metastasis assessment
PMID: 32619179
6
CPN1 dysregulation contributes to bradykinin cascade impairment in COVID-19 patients
PMID: 35812405
Disease Associationsβ“˜21
neurodegenerative diseaseOpen Targets
0.33Weak
non-alcoholic fatty liver diseaseOpen Targets
0.30Weak
sialolithiasisOpen Targets
0.27Weak
obesityOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.08Suggestive
glioblastoma multiformeOpen Targets
0.08Suggestive
infectionOpen Targets
0.06Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
hypoparathyroidism, familial isolated, 2Open Targets
0.04Suggestive
Alzheimer diseaseOpen Targets
0.04Suggestive
gastric cancerOpen Targets
0.04Suggestive
intestinal hypomagnesemia 1Open Targets
0.04Suggestive
Primary hypomagnesemia with secondary hypocalcemiaOpen Targets
0.04Suggestive
familial isolated hyperparathyroidismOpen Targets
0.04Suggestive
hyperparathyroidismOpen Targets
0.04Suggestive
adamantinomaOpen Targets
0.04Suggestive
ulna metaphyseal dysplasia syndromeOpen Targets
0.04Suggestive
blue diaper syndromeOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
Carboxypeptidase N deficiencyUniProt
Pathogenic Variants2
NM_001308.3(CPN1):c.734C>T (p.Thr245Met)Pathogenic
Anaphylotoxin inactivator deficiency
β˜†β˜†β˜†β˜†2024β†’ Residue 245
NM_001308.3(CPN1):c.173dup (p.His59fs)Pathogenic
Anaphylotoxin inactivator deficiency
β˜†β˜†β˜†β˜†2003β†’ Residue 59
View on ClinVar β†—
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
Preparing viewer…
PDB2NSM Β· 2.10 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.01LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.76 [0.58–1.01]
RankingsWhere CPN1 stands among ~20K protein-coding genes
  • #11,312of 20,598
    Most Researched33
  • #4,497of 5,498
    Most Pathogenic Variants2
  • #9,833of 17,882
    Most Constrained (LOEUF)1.01
Genes detectedCPN1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Hereditary angioedema with normal C1 inhibitor associated with carboxypeptidase N deficiency.
PMID: 38445235
J Allergy Clin Immunol Glob Β· 2024
1.00
2
Chromosomal localization of the genes for human carboxypeptidase D (CPD) and the active 50-kilodalton subunit of human carboxypeptidase N (CPN1).
PMID: 9628828
Genomics Β· 1998
0.90
3
The BNT162b2 mRNA vaccine demonstrates reduced age-associated T
PMID: 39569372
iScience Β· 2024
0.80
4
Fission yeast Caprin protein is required for efficient heterochromatin establishment.
PMID: 40063661
PLoS Genet Β· 2025
0.70
5
Serum Carboxypeptidase N1 Serves as a Potential Biomarker Complementing CA15-3 for Breast Cancer.
PMID: 32619179
Anticancer Agents Med Chem Β· 2020
0.60