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GeneE
4 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CRIPTO3
cripto, EGF-CFC family member 3
Chromosome X Β· Xq23
NCBI Gene: 6998Ensembl: ENSG00000225366.7HGNC: HGNC:11703UniProt: P51864
7PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
signal transductionplasma membraneactivin receptor bindingblood vessel developmentventral herniaInguinal herniaresponse to statinHernia
✦AI Summary

CRIPTO3 encodes a functional EGF-CFC family protein that activates Nodal-dependent signaling pathways 1. Despite being initially classified as a pseudogene with only six amino acid differences from CRIPTO1, CRIPTO3 is a bona fide translated protein expressed in human tissues and cancer samples 2. Both CRIPTO3 and CRIPTO1 compete for binding to key signaling molecules including Nodal, GRP78, and activin receptor-like kinase 4 (ALK4), indicating functional overlap in cell signaling 1. During embryonic development, CRIPTO3 expression is regulated by germ cell nuclear factor (GCNF), which represses it during differentiation of stem cells, suggesting roles in maintaining pluripotency 3. Notably, CRIPTO3 and CRIPTO1 display distinct subcellular localizations and tissue-specific expression patterns; for example, CRIPTO3 localizes cytoplasmically while CRIPTO1 shows nuclear localization in placental tissue, and their relative expression levels vary across fetal tissues 4. CRIPTO3 is particularly expressed in certain cancers where it may function as an oncogene through activation of retrogene-mediated Nodal signaling 2. These findings suggest CRIPTO3 has independent functions in both developmental signaling and tumorigenesis, with potential clinical implications for cancer prognosis 1.

Sources cited
1
CRIPTO3 is a functional protein that competes with CRIPTO1 for binding to Nodal, GRP78, and ALK4 in cell signaling pathways and is expressed in tumor tissue and cancer patient sera
PMID: 39518018
2
CRIPTO3 and CRIPTO1 display distinct subcellular localization patterns and differential tissue-specific expression in placenta, umbilical cord, and fetal tissues
PMID: 40835641
3
CRIPTO3 expression is regulated by GCNF during stem cell differentiation, indicating a role in maintaining pluripotency
PMID: 16954206
4
CRIPTO3 is an expressed gene rather than a non-functional pseudogene, particularly in certain cancers, and both CRIPTO3 and CRIPTO1 proteins are functional in Nodal-dependent signaling pathways
PMID: 18835250
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
ventral herniaOpen Targets
0.16Weak
Inguinal herniaOpen Targets
0.16Weak
response to statinOpen Targets
0.11Weak
HerniaOpen Targets
0.11Weak
coronary artery diseaseOpen Targets
0.10Weak
hemorrhoidOpen Targets
0.10Weak
Umbilical herniaOpen Targets
0.10Weak
vertebral joint diseaseOpen Targets
0.09Suggestive
open-angle glaucomaOpen Targets
0.09Suggestive
spinal stenosisOpen Targets
0.09Suggestive
response to surgeryOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.09Suggestive
vertebral disorderOpen Targets
0.09Suggestive
hypogonadismOpen Targets
0.06Suggestive
Parkinson diseaseOpen Targets
0.06Suggestive
chronic lymphocytic leukemiaOpen Targets
0.06Suggestive
familial hypercholesterolemiaOpen Targets
0.06Suggestive
Disorder of lipid metabolismOpen Targets
0.05Suggestive
metabolic diseaseOpen Targets
0.05Suggestive
nail-patella syndromeOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
CFC1BShared pathway100%CFC1Shared pathway100%NEK8Shared pathway25%DAW1Shared pathway22%CRIPTOShared pathway20%SMYD4Shared pathway20%
Tissue Expression6 tissues
Ovary
100%
Brain
50%
Lung
20%
Heart
0%
Bone Marrow
0%
Liver
0%
Gene Interaction Network
Click a node to explore
CRIPTO3CFC1BCFC1NEK8DAW1CRIPTOSMYD4
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt P51864
View on AlphaFold β†—
RankingsWhere CRIPTO3 stands among ~20K protein-coding genes
  • #17,810of 20,598
    Most Researched7
Genes detectedCRIPTO3
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
Human Cripto-1 and Cripto-3 Protein Expression in Normal and Malignant Settings That Conflicts with Established Conventions.
PMID: 39518018
Cancers (Basel) Β· 2024
1.00
2
Cripto-1 and Cripto-3 differential expression pattern in human placenta, umbilical cord and fetal tissues suggests new functions for these proteins.
PMID: 40835641
Sci Rep Β· 2025
0.75
3
Germ cell nuclear factor is a repressor of CRIPTO-1 and CRIPTO-3.
PMID: 16954206
J Biol Chem Β· 2006
0.50
4
CRIPTO3, a presumed pseudogene, is expressed in cancer.
PMID: 18835250
Biochem Biophys Res Commun Β· 2008
0.25