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GeneE
27 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CYP24A1
cytochrome P450 family 24 subfamily A member 1
Chromosome 20 Β· 20q13.2
NCBI Gene: 1591Ensembl: ENSG00000019186.11HGNC: HGNC:2602UniProt: Q07973
273PubMed Papers
21Diseases
0Drugs
63Pathogenic Variants
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
response to vitamin Dvitamin D3 25-hydroxylase activitymitochondrion1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activityAutosomal recessive infantile hypercalcemiahypercalcemia, infantileatopic eczemaneurodegenerative disease
✦AI Summary

CYP24A1 is a mitochondrial cytochrome P450 monooxygenase essential for vitamin D catabolism and calcium homeostasis. It catalyzes the inactivation of both 25-hydroxyvitamin D (calcidiol) and the active hormone 1,25-dihydroxyvitamin D (calcitriol) through C24- and C23-oxidation pathways, ultimately producing calcitroic acid and 25(OH)D3-26,23-lactone for excretion 1. The enzyme uses molecular oxygen to hydroxylate vitamin D metabolites, with electrons supplied by NADPH via the FDXR/FDX1 electron transport system. Kidney CYP24A1 regulates systemic vitamin D levels, while intestinal CYP24A1 exerts tissue-specific effects independent of systemic regulation 1. In chr20 kidney disease, elevated phosphate and FGF-23 increase CYP24A1 expression, reducing vitamin D status and contributing to renal osteodystrophy 2. Loss-of-function mutations in CYP24A1 cause idiopathic infantile hypercalcemia, characterized by PTH-independent hypercalcemia, hypercalciuria, and nephrocalcinosis; even monoallelic variants can cause symptomatic disease 3. Additionally, CYP24A1 polymorphisms associate with cancer susceptibility, with rs4809960 showing reduced cancer risk in multiple populations 4.

Sources cited
1
CYP24A1 inactivates 1,25D and 25D; kidney CYP24A1 regulates systemic vitamin D while intestinal CYP24A1 has independent local effects
PMID: 39688907
2
CYP24A1 catalyzes conversion of 25-OHD3 and 1,25-(OH)2D3 into 24-hydroxylated products; elevated CYP24A1 expression in CKD reduces vitamin D status
PMID: 21610497
3
Biallelic and monoallelic CYP24A1 variants cause idiopathic infantile hypercalcemia with hypercalcemia, hypercalciuria, and nephrocalcinosis
PMID: 38504242
4
CYP24A1 rs4809960 polymorphism associated with decreased cancer risk in Caucasian and Asian populations and breast cancer risk
PMID: 37670334
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
Autosomal recessive infantile hypercalcemiaOpen Targets
0.80Strong
hypercalcemia, infantileOpen Targets
0.57Moderate
atopic eczemaOpen Targets
0.51Moderate
neurodegenerative diseaseOpen Targets
0.48Moderate
multiple sclerosisOpen Targets
0.48Moderate
nephrolithiasisOpen Targets
0.48Moderate
genetic disorderOpen Targets
0.47Moderate
bladder calculusOpen Targets
0.43Moderate
Eczematoid dermatitisOpen Targets
0.42Moderate
ureterolithiasisOpen Targets
0.41Moderate
HypercalcemiaOpen Targets
0.38Weak
Autosomal dominant familial hematuria - retinal arteriolar tortuosity - contracturesOpen Targets
0.34Weak
Muscle spasmOpen Targets
0.34Weak
deep vein thrombosisOpen Targets
0.34Weak
Abnormal thrombosisOpen Targets
0.33Weak
allergic diseaseOpen Targets
0.33Weak
respiratory system diseaseOpen Targets
0.33Weak
parasitic infectionOpen Targets
0.31Weak
urolithiasisOpen Targets
0.26Weak
EpiphoraOpen Targets
0.23Weak
Hypercalcemia, infantile, 1UniProt
Pathogenic Variants63
NM_000782.5(CYP24A1):c.1186C>T (p.Arg396Trp)Pathogenic
Hypercalcemia, infantile, 1|Muscle spasm|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2026β†’ Residue 396
NM_000782.5(CYP24A1):c.443T>C (p.Leu148Pro)Pathogenic
Hypercalcemia, infantile, 1|not provided|CYP24A1-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 148
NM_000782.5(CYP24A1):c.1226T>C (p.Leu409Ser)Pathogenic
Hypercalcemia, infantile, 1|not provided|CYP24A1-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 409
NM_000782.5(CYP24A1):c.425AAG[1] (p.Glu143del)Pathogenic
Hypercalcemia, infantile, 1|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 143
NM_000782.5(CYP24A1):c.475C>T (p.Arg159Trp)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2026β†’ Residue 159
NM_000782.5(CYP24A1):c.964G>A (p.Glu322Lys)Pathogenic
Hypercalcemia, infantile, 1|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 322
NM_000782.5(CYP24A1):c.667A>T (p.Arg223Ter)Pathogenic
Hypercalcemia, infantile, 1|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 223
NM_000782.5(CYP24A1):c.400T>G (p.Trp134Gly)Pathogenic
not provided|Renal tubulopathies
β˜…β˜…β˜†β˜†2025β†’ Residue 134
NM_000782.5(CYP24A1):c.476G>A (p.Arg159Gln)Pathogenic
Hypercalcemia, infantile, 1|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 159
NM_000782.5(CYP24A1):c.1147G>C (p.Glu383Gln)Pathogenic
not provided|Hypercalcemia, infantile, 1|CYP24A1-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 383
NM_000782.5(CYP24A1):c.999_1006del (p.Ser334fs)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2025β†’ Residue 334
NM_000782.5(CYP24A1):c.1187G>A (p.Arg396Gln)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2025β†’ Residue 396
NM_000782.5(CYP24A1):c.62del (p.Pro21fs)Pathogenic
Hypercalcemia, infantile, 1|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 21
NM_000782.5(CYP24A1):c.364G>T (p.Glu122Ter)Pathogenic
Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2025β†’ Residue 122
NM_000782.5(CYP24A1):c.1396C>T (p.Arg466Ter)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2024β†’ Residue 466
NM_000782.5(CYP24A1):c.678del (p.Leu227fs)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2024β†’ Residue 227
NM_000782.5(CYP24A1):c.1384_1385del (p.Cys462fs)Pathogenic
not provided|Hypercalcemia, infantile, 1
β˜…β˜…β˜†β˜†2023β†’ Residue 462
NM_000782.5(CYP24A1):c.1039C>T (p.Gln347Ter)Pathogenic
Hypercalcemia, infantile, 1|not provided
β˜…β˜…β˜†β˜†2015β†’ Residue 347
NM_000782.5(CYP24A1):c.1199del (p.Lys400fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 400
NM_000782.5(CYP24A1):c.1339dup (p.Ile447fs)Pathogenic
Hypercalcemia, infantile, 1
β˜…β˜†β˜†β˜†2025β†’ Residue 447
View on ClinVar β†—
Related Genes
GCProtein interaction90%CA1Protein interaction88%CA8Protein interaction88%CA5BProtein interaction88%CA13Protein interaction85%CA14Protein interaction85%
Tissue Expression6 tissues
Brain
100%
Lung
73%
Bone Marrow
36%
Liver
0%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
CYP24A1GCCA1CA8CA5BCA13CA14
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q07973
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.51LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.17 [0.92–1.51]
RankingsWhere CYP24A1 stands among ~20K protein-coding genes
  • #1,339of 20,598
    Most Researched273 Β· top 10%
  • #1,123of 5,498
    Most Pathogenic Variants63 Β· top quartile
  • #15,209of 17,882
    Most Constrained (LOEUF)1.51
Genes detectedCYP24A1
Sources retrieved27 papers
Response timeβ€”
πŸ“„ Sources
27β–Ό
1
Calcium and Vitamin D Supplementation and Their Association with Kidney Stone Disease: A Narrative Review.
PMID: 34959915
Nutrients Β· 2021
1.00
2
Intestinal Cyp24a1 regulates vitamin D locally independent of systemic regulation by renal Cyp24a1 in mice.
PMID: 39688907
J Clin Invest Β· 2024
0.90
3
Hypercalcemia and CYP24A1 Gene Mutation Diagnosed in the 2nd Trimester of a Twin Pregnancy: A Case Report.
PMID: 34662328
Am J Case Rep Β· 2021
0.84
4
Biallelic and monoallelic pathogenic variants in CYP24A1 and SLC34A1 genes cause idiopathic infantile hypercalcemia.
PMID: 38504242
Orphanet J Rare Dis Β· 2024
0.80
5
Vitamin D and Kidney Stones.
PMID: 32032687
Urology Β· 2020
0.76