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8 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CYTH3
cytohesin 3
Chromosome 7 · 7p22.1
NCBI Gene: 9265Ensembl: ENSG00000008256.18HGNC: HGNC:9504UniProt: B7Z2V9
43PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
guanyl-nucleotide exchange factor activityprotein bindingphosphatidylinositol-3,4,5-trisphosphate bindingGolgi vesicle transportneurodegenerative diseasebrain aneurysmcircadian rhythm sleep disorderinflammatory bowel disease
✦AI Summary

CYTH3 (cytohesin 3) is a guanine nucleotide exchange factor that promotes ARF1 and ARF6 activation by facilitating GTP binding 1. The protein functions in membrane trafficking, vesicle transport, and epithelial cell polarity establishment through its role in activating ADP-ribosylation factors, which regulate actin cytoskeleton rearrangements and G protein-coupled receptor internalization 1. In disease contexts, CYTH3 has emerged as a clinically relevant biomarker. In ovarian cancer, CYTH3 ranked among the most important features in machine learning models predicting cisplatin chemosensitivity and overall survival 2. In liver fibrosis, upregulation of CYTH3 promotes hepatic stellate cell activation and collagen deposition through a competing endogenous RNA mechanism involving the lncRNA Neat1 and microRNAs miR-148a-3p and miR-22-3p; CYTH3 knockdown attenuated fibrosis progression 3. CYTH3 also functions in breast cancer metastasis, where the lncRNA H19 modulates CYTH3 expression to regulate cell migration and epithelial-mesenchymal plasticity 4. Additionally, genetic variants in the CYTH3 3' untranslated region associate with protection against Shigella-associated diarrhea in infants, potentially through effects on bacterial type 3 secretion system activity 5. DNA methylation changes in CYTH3 were identified in children exposed to gestational diabetes, linking epigenetic modifications to metabolic risk 6.

Sources cited
1
CYTH3 is a GEF for ARF6 activation; ARF6 and CYTH3 expression are reduced in complicated pregnancies
PMID: 22666423
2
CYTH3 is a predictive biomarker for cisplatin chemosensitivity and overall survival in ovarian cancer
PMID: 34413360
3
CYTH3 upregulation promotes liver fibrosis and HSC activation via Neat1/miRNA ceRNA mechanism
PMID: 33550894
4
CYTH3 regulates cell migration and EMT/MET plasticity in breast cancer metastasis via H19-miRNA axis
PMID: 28611183
5
CYTH3 3' UTR variant rs10266841 is protective against Shigella-associated diarrhea in infants
PMID: 33649051
6
CYTH3 DNA methylation differences identified in children exposed to gestational diabetes
PMID: 39806399
7
CYTH3 included in FGFR3 alteration-related gene signature predicting bladder cancer prognosis and immunotherapy response
PMID: 35958598
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.35Weak
brain aneurysmOpen Targets
0.29Weak
circadian rhythm sleep disorderOpen Targets
0.27Weak
inflammatory bowel diseaseOpen Targets
0.24Weak
preeclampsiaOpen Targets
0.12Weak
neonatal intrahepatic cholestasis due to citrin deficiencyOpen Targets
0.05Suggestive
glycogen storage disease VIOpen Targets
0.04Suggestive
LIPE-related familial partial lipodystrophyOpen Targets
0.04Suggestive
lipodystrophy, congenital generalized, type 5Open Targets
0.04Suggestive
PLIN1-related familial partial lipodystrophyOpen Targets
0.04Suggestive
Pallister-Hall syndromeOpen Targets
0.04Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
familial partial lipodystrophy, Kobberling typeOpen Targets
0.04Suggestive
Familial partial lipodystrophy, Köbberling typeOpen Targets
0.04Suggestive
PPARG-related familial partial lipodystrophyOpen Targets
0.04Suggestive
congenital generalized lipodystrophy type 3Open Targets
0.04Suggestive
Generalized congenital lipodystrophy with myopathyOpen Targets
0.04Suggestive
congenital bile acid synthesis defect 2Open Targets
0.04Suggestive
Congenital bile acid synthesis defect type 2Open Targets
0.04Suggestive
progressive familial intrahepatic cholestasisOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PIK3CDProtein interaction100%PIK3CBProtein interaction100%CYTIPProtein interaction91%TAMALINProtein interaction88%PLEK2Protein interaction83%PLEKProtein interaction83%
Tissue Expression6 tissues
Heart
100%
Lung
63%
Ovary
48%
Bone Marrow
45%
Brain
36%
Liver
14%
Gene Interaction Network
Click a node to explore
CYTH3PIK3CDPIK3CBCYTIPTAMALINPLEK2PLEK
PROTEIN STRUCTURE
Preparing viewer…
PDB4KAX · 1.85 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.55Moderately Constrained
pLIⓘ
0.83Intermediate
Observed/Expected LoF0.37 [0.25–0.55]
RankingsWhere CYTH3 stands among ~20K protein-coding genes
  • #9,715of 20,598
    Most Researched43
  • #3,538of 17,882
    Most Constrained (LOEUF)0.55 · top quartile
Genes detectedCYTH3
Sources retrieved8 papers
Response time—
📄 Sources
8▼
1
A machine learning approach to identify predictive molecular markers for cisplatin chemosensitivity following surgical resection in ovarian cancer.
PMID: 34413360
Sci Rep · 2021
1.00
2
LncRNA Neat1 expedites the progression of liver fibrosis in mice through targeting miR-148a-3p and miR-22-3p to upregulate
PMID: 33550894
Cell Cycle · 2021
0.88
3
Longitudinal DNA methylation profiles in saliva of offspring from mothers with gestational diabetes: associations with early childhood growth patterns.
PMID: 39806399
Cardiovasc Diabetol · 2025
0.75
4
ADP-ribosylation factor 6 expression and activation are reduced in myometrium in complicated pregnancies.
PMID: 22666423
PLoS One · 2012
0.63
5
Host Genome-Wide Association Study of Infant Susceptibility to
PMID: 33649051
Infect Immun · 2021
0.50