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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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DPAGT1
dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
Chromosome 11 Β· 11q23.3
NCBI Gene: 1798Ensembl: ENSG00000172269.20HGNC: HGNC:2995UniProt: A0A804HI18
55PubMed Papers
22Diseases
0Drugs
41Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activityUDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activityprotein bindingprotein N-linked glycosylationDPAGT1-congenital disorder of glycosylationCongenital myasthenic syndromesneurodegenerative diseasecongenital disorder of glycosylation
✦AI Summary

DPAGT1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1) catalyzes the initial and rate-limiting step of N-linked glycosylation by transferring N-acetylglucosamine-1-phosphate from UDP-GlcNAc onto dolichyl phosphate to form GlcNAc-P-P-dolichol at the endoplasmic reticulum membrane 1. This lipid-linked oligosaccharide intermediate is subsequently elaborated with nine mannoses and three glucoses before transfer to nascent proteins by oligosaccharyltransferases, enabling proper protein folding and function 2. DPAGT1 mutations cause two major human diseases: Congenital Disorder of Glycosylation type 1J (DPAGT1-CDG) and Congenital Myasthenic Syndrome 13 (CMS13) 3. DPAGT1-CDG presents with multisystem manifestations including failure to thrive, seizures, and psychomotor retardation, with severe cases resulting in intrauterine death 4. CMS13 manifests as neuromuscular junction dysfunction with limb-girdle weakness 5, affecting approximately 9.8% of genetically diagnosed CMS patients in Indian cohorts 5. Clinically, DPAGT1 inhibition suppresses HER2 shedding and trastuzumab resistance in breast cancer by preventing N-glycosylation of ADAM10 sheddase 1. Emerging therapeutic approaches targeting dopamine D2 signaling show promise for DPAGT1-CDG 6, while O-GlcNAcylation modulation may provide neuroprotection in glycosylation disorders 7.

Sources cited
1
DPAGT1 catalyzes the initial step of dolichol-linked oligosaccharide biosynthesis and regulates N-glycosylation of ADAM10 sheddase in HER2 shedding
PMID: 37463446
2
DPAGT1 mutations cause Congenital Myasthenic Syndrome and are associated with neuromuscular junction defects
PMID: 36835142
3
DPAGT1 mutations cause CMS with infancy-onset limb-girdle phenotype and novel variants have been identified
PMID: 37005892
4
DPAGT1-CDG causes multisystem abnormalities and intrauterine death, with novel compound heterozygous variants identified
PMID: 37421173
5
DPAGT1 is one of the most common glycosylation genes causing CMS, accounting for 9.8% of genetically diagnosed cases in Indian cohorts
PMID: 37721175
6
O-GlcNAcylation increases Dpagt1 transcript and protein abundance, and modulating Dpagt1 activity affects disease phenotypes in glycosylation disorders
PMID: 39561044
7
Dopamine D2 receptor inhibition partially rescues DPAGT1-CDG models, revealing dopamine signaling as a potential therapeutic target
PMID: 39466823
Disease Associationsβ“˜22
DPAGT1-congenital disorder of glycosylationOpen Targets
0.81Strong
Congenital myasthenic syndromesOpen Targets
0.80Strong
neurodegenerative diseaseOpen Targets
0.52Moderate
congenital disorder of glycosylationOpen Targets
0.50Moderate
genetic disorderOpen Targets
0.45Moderate
congenital disorder of glycosylation type IOpen Targets
0.37Weak
congenital myasthenic syndromes with glycosylation defectOpen Targets
0.37Weak
tubular aggregate myopathyOpen Targets
0.34Weak
Abnormality of metabolism/homeostasisOpen Targets
0.27Weak
lysosomal storage diseaseOpen Targets
0.18Weak
breast cancerOpen Targets
0.06Suggestive
Autosomal dominant polycystic kidney diseaseOpen Targets
0.05Suggestive
oral squamous cell carcinomaOpen Targets
0.03Suggestive
acute kidney injuryOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
hypertensionOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
lip and oral cavity carcinomaOpen Targets
0.02Suggestive
type 2 diabetes mellitusOpen Targets
0.02Suggestive
Townes-Brocks syndromeOpen Targets
0.02Suggestive
Congenital disorder of glycosylation 1JUniProt
Myasthenic syndrome, congenital, 13UniProt
Pathogenic Variants41
NM_001382.4(DPAGT1):c.1139C>T (p.Thr380Ile)Pathogenic
DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation|Congenital myasthenic syndrome 13|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 380
NM_001382.4(DPAGT1):c.902G>A (p.Arg301His)Pathogenic
Abnormality of metabolism/homeostasis|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation
β˜…β˜…β˜†β˜†2025β†’ Residue 301
NM_001382.4(DPAGT1):c.643+1G>ALikely pathogenic
DPAGT1-congenital disorder of glycosylation|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜…β˜†β˜†2025
NM_001382.4(DPAGT1):c.324G>C (p.Met108Ile)Pathogenic
Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 108
NM_001382.4(DPAGT1):c.380_395dup (p.Ser133fs)Pathogenic
Inborn genetic diseases|Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation|Congenital disorder of glycosylation|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 133
NM_001382.4(DPAGT1):c.1A>C (p.Met1Leu)Pathogenic
not provided|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜…β˜†β˜†2022β†’ Residue 1
NM_001382.4(DPAGT1):c.26dup (p.Met9fs)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation|Congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2026β†’ Residue 9
NM_001382.4(DPAGT1):c.737C>A (p.Ser246Ter)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2026β†’ Residue 246
NM_001382.4(DPAGT1):c.699dup (p.Thr234fs)Pathogenic
Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜†β˜†β˜†2025β†’ Residue 234
NM_001382.4(DPAGT1):c.762_765del (p.Cys255fs)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2025β†’ Residue 255
NM_001382.4(DPAGT1):c.349G>A (p.Val117Ile)Likely pathogenic
Congenital myasthenic syndrome 13|DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜†β˜†β˜†2025β†’ Residue 117
NM_001382.4(DPAGT1):c.282+1G>ALikely pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2025
NM_001382.4(DPAGT1):c.172C>T (p.Gln58Ter)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2025β†’ Residue 58
NM_001382.4(DPAGT1):c.980_981del (p.Ser327fs)Pathogenic
DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜†β˜†β˜†2025β†’ Residue 327
NM_001382.4(DPAGT1):c.6G>A (p.Trp2Ter)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2024β†’ Residue 2
NM_001382.4(DPAGT1):c.1123C>T (p.His375Tyr)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 375
NM_001382.4(DPAGT1):c.1133A>T (p.Asn378Ile)Pathogenic
Myopathy with tubular aggregates
β˜…β˜†β˜†β˜†2024β†’ Residue 378
NM_001382.4(DPAGT1):c.1005+1G>ALikely pathogenic
DPAGT1-congenital disorder of glycosylation;Congenital myasthenic syndrome 13
β˜…β˜†β˜†β˜†2024
NM_001382.4(DPAGT1):c.732C>A (p.Tyr244Ter)Pathogenic
Congenital myasthenic syndrome 13;DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2023β†’ Residue 244
NM_001382.4(DPAGT1):c.160A>T (p.Ile54Phe)Likely pathogenic
DPAGT1-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2023β†’ Residue 54
View on ClinVar β†—
Related Genes
ALG10BShared pathway100%RFT1Shared pathway100%ALG10Shared pathway100%ALG9Shared pathway100%ALG6Protein interaction100%ALG13Protein interaction99%
Tissue Expression6 tissues
Liver
100%
Lung
62%
Ovary
57%
Bone Marrow
42%
Heart
39%
Brain
37%
Gene Interaction Network
Click a node to explore
DPAGT1ALG10BRFT1ALG10ALG9ALG6ALG13
PROTEIN STRUCTURE
Preparing viewer…
PDB6JQ3 Β· 2.50 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.83LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.60 [0.43–0.83]
RankingsWhere DPAGT1 stands among ~20K protein-coding genes
  • #8,195of 20,598
    Most Researched55
  • #1,517of 5,498
    Most Pathogenic Variants41
  • #7,154of 17,882
    Most Constrained (LOEUF)0.83
Genes detectedDPAGT1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Inhibition of DPAGT1 suppresses HER2 shedding and trastuzumab resistance in human breast cancer.
PMID: 37463446
J Clin Invest Β· 2023
1.00
2
Clinical and Pathologic Features of Congenital Myasthenic Syndromes Caused by 35 Genes-A Comprehensive Review.
PMID: 36835142
Int J Mol Sci Β· 2023
0.90
3
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
0.80
4
Clinical and genetic characterisation of a large Indian congenital myasthenic syndrome cohort.
PMID: 37721175
Brain Β· 2024
0.70
5
Novel DPAGT1 Gene Mutation in Two Twins with Congenital Myasthenic Syndrome and a Review of the Literature.
PMID: 37005892
J Neuromuscul Dis Β· 2023
0.60