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7 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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EFCAB7
EF-hand calcium binding domain 7
Chromosome 1 · 1p31.3
NCBI Gene: 84455Ensembl: ENSG00000203965.14HGNC: HGNC:29379UniProt: A8K855
22PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of transcription by RNA polymerase IIcytoplasmic side of plasma membraneplasma membrane protein complexciliary membranepostaxial polydactylyobesityneoplasmCOVID-19
✦AI Summary

EFCAB7 is a ciliary calcium-binding protein that functions as a critical component of the EvC complex, which positively regulates Hedgehog signaling during development 1. EFCAB7 anchors the EVC-EVC2 complex at the base of primary cilia, creating a signaling microdomain essential for GLI2 activation 1. Loss-of-function variants in EFCAB7 impair ciliary localization of the EVC-EVC2 complex and disrupt Shh/Gli pathway activity, leading to transcriptional downregulation of cardiac development genes 2. Clinically, EFCAB7 mutations cause nonsyndromic postaxial polydactyly through disrupted Hedgehog signaling during limb formation 3. A splicing variant (c.683-1G>C) causes Tetralogy of Fallot, establishing EFCAB7 as a causative gene for congenital heart disease by impairing cardiac septation 2. EFCAB7 may also modify phenotypes in Ellis-van Creveld syndrome when co-inherited with EVC/EVC2 mutations 4. Notably, EFCAB7 is dispensable for male fertility in mice 5, and recent evidence suggests EFCAB7 upregulation promotes hepatocellular carcinoma progression through PARK7 interaction 6. These findings establish EFCAB7's primary role in ciliary-dependent developmental signaling with emerging implications in cancer biology.

Sources cited
1
EFCAB7-IQCE complex anchors EVC-EVC2 at ciliary base and positively regulates Hedgehog signaling through GLI2 activation
PMID: 24582806
2
EFCAB7 splicing variant causes Tetralogy of Fallot through impaired ciliogenesis and disrupted Shh/Gli pathway, reducing Gli target gene expression
PMID: 39894222
3
Homozygous frameshift deletions in EFCAB7 cause nonsyndromic postaxial polydactyly by disrupting Hedgehog pathway signaling
PMID: 37684519
4
EFCAB7 missense mutations may modify phenotypes in Ellis-van Creveld syndrome through interaction with EVC
PMID: 26748586
5
EFCAB7 is dispensable for male fertility in mice when individually ablated
PMID: 41194443
6
EFCAB7 upregulation after radiofrequency ablation promotes hepatocellular carcinoma progression by regulating PARK7
PMID: 39276379
Disease Associationsⓘ20
postaxial polydactylyOpen Targets
0.15Weak
obesityOpen Targets
0.15Weak
neoplasmOpen Targets
0.06Suggestive
COVID-19Open Targets
0.05Suggestive
severe acute respiratory syndromeOpen Targets
0.05Suggestive
deafnessOpen Targets
0.05Suggestive
hepatocellular carcinomaOpen Targets
0.05Suggestive
autosomal recessive nonsyndromic hearing loss 9Open Targets
0.04Suggestive
liver cancerOpen Targets
0.04Suggestive
autosomal dominant nonsyndromic hearing lossOpen Targets
0.04Suggestive
eye colorOpen Targets
0.03Suggestive
congenital enteropathy due to enteropeptidase deficiencyOpen Targets
0.03Suggestive
hearing loss, autosomal recessiveOpen Targets
0.03Suggestive
gastric mucosal hypertrophyOpen Targets
0.03Suggestive
Deafness - small bowel diverticulosis - neuropathyOpen Targets
0.03Suggestive
deafness-small bowel diverticulosis-neuropathy syndromeOpen Targets
0.03Suggestive
acute quadriplegic myopathyOpen Targets
0.03Suggestive
hypotensionOpen Targets
0.02Suggestive
Retinal hemorrhageOpen Targets
0.02Suggestive
Paralytic ileusOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
EVC2Protein interaction100%SPA17Protein interaction84%AKAP14Protein interaction79%EVCProtein interaction75%IQCEProtein interaction62%ACTRT1Shared pathway25%
Tissue Expression6 tissues
Heart
100%
Ovary
98%
Brain
80%
Bone Marrow
49%
Lung
33%
Liver
22%
Gene Interaction Network
Click a node to explore
EFCAB7EVC2SPA17AKAP14EVCIQCEACTRT1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt A8K855
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.11LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.86 [0.68–1.11]
RankingsWhere EFCAB7 stands among ~20K protein-coding genes
  • #13,650of 20,598
    Most Researched22
  • #11,407of 17,882
    Most Constrained (LOEUF)1.11
Genes detectedEFCAB7
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
A splicing variant in EFCAB7 hinders ciliary transport and disrupts cardiac development.
PMID: 39894222
J Biol Chem · 2025
1.00
2
Variants in EFCAB7 underlie nonsyndromic postaxial polydactyly.
PMID: 37684519
Eur J Hum Genet · 2023
0.86
3
EFCAB7 and IQCE regulate hedgehog signaling by tethering the EVC-EVC2 complex to the base of primary cilia.
PMID: 24582806
Dev Cell · 2014
0.71
4
Truncation and microdeletion of EVC/EVC2 with missense mutation of EFCAB7 in Ellis-van Creveld syndrome.
PMID: 26748586
Congenit Anom (Kyoto) · 2016
0.57
5
CRISPR/Cas9-mediated genome editing reveals six testis-enriched genes dispensable for male fertility in mice.
PMID: 41194443
J Biomed Res · 2025
0.43