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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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EYA4
EYA transcriptional coactivator and phosphatase 4
Chromosome 6 Β· 6q23.2
NCBI Gene: 2070Ensembl: ENSG00000112319.21HGNC: HGNC:3522UniProt: A0A0S2Z3Q2
96PubMed Papers
22Diseases
0Drugs
87Pathogenic Variants
FUNCTIONAL ROLE
DNA RepairTranscription Factor
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingprotein tyrosine phosphatase activitycell differentiationpositive regulation of DNA repairautosomal dominant nonsyndromic hearing loss 10dilated cardiomyopathy 1Jhearing lossSensorineural deafness with dilated cardiomyopathy
✦AI Summary

EYA4 is a multifunctional tyrosine phosphatase that regulates DNA repair, transcription, and cell cycle progression. Its primary catalytic function involves dephosphorylating histone H2AX at tyrosine 142, promoting efficient DNA repair and distinguishing between apoptotic and repair responses to genotoxic stress 1. Beyond DNA repair, EYA4 dephosphorylates PLK1 at tyrosine 445 during G2 phase, enabling centrosome maturation and successful mitosis 2. EYA4 also regulates transcription factors; it dephosphorylates Ξ²-catenin and SIX1, inhibiting their tumor-promoting activities 34. Additionally, EYA4 functions as a component of ΞΌ-opioid receptor signaling networks 5. EYA4 exhibits tissue-dependent tumor roles: it acts as a tumor suppressor in non-nervous system cancers including intrahepatic cholangiocarcinoma and pancreatic ductal adenocarcinoma 63, but promotes tumor growth in nervous system malignancies 1. Clinically, reduced EYA4 expression correlates with poor prognosis and shorter survival 634. Mutations cause autosomal dominant deafness (DFNA10) and dilated cardiomyopathy, accounting for 2.5% of genetic non-syndromic hearing loss cases in Europe 7. EYA4 expression in peripheral blood mononuclear cells serves as a biomarker for esophageal carcinogenesis progression 8. EYA4 expression levels and methylation profiles may predict cancer prognosis and treatment response, positioning EYA4 as a potential therapeutic target 1.

Sources cited
1
Its primary catalytic function involves dephosphorylating histone H2AX at tyrosine 142, promoting efficient DNA repair and distinguishing between apoptotic and repair responses to genotoxic stress .
PMID: 36849065
2
Beyond DNA repair, EYA4 dephosphorylates PLK1 at tyrosine 445 during G2 phase, enabling centrosome maturation and successful mitosis .
PMID: 38360978
3
Additionally, EYA4 functions as a component of ΞΌ-opioid receptor signaling networks .
PMID: 38528119
4
Mutations cause autosomal dominant deafness (DFNA10) and dilated cardiomyopathy, accounting for 2.5% of genetic non-syndromic hearing loss cases in Europe .
PMID: 35044523
5
EYA4 expression in peripheral blood mononuclear cells serves as a biomarker for esophageal carcinogenesis progression .
PMID: 19939248
Disease Associationsβ“˜22
autosomal dominant nonsyndromic hearing loss 10Open Targets
0.77Strong
dilated cardiomyopathy 1JOpen Targets
0.71Strong
hearing lossOpen Targets
0.62Moderate
Sensorineural deafness with dilated cardiomyopathyOpen Targets
0.62Moderate
deafnessOpen Targets
0.60Moderate
autosomal dominant nonsyndromic hearing lossOpen Targets
0.53Moderate
Sensorineural hearing impairmentOpen Targets
0.48Moderate
age-related hearing impairmentOpen Targets
0.47Moderate
Abnormality of the cardiovascular systemOpen Targets
0.47Moderate
atrial fibrillationOpen Targets
0.46Moderate
nonsyndromic genetic hearing lossOpen Targets
0.45Moderate
androgenetic alopeciaOpen Targets
0.42Moderate
disorder of earOpen Targets
0.41Moderate
Meniere diseaseOpen Targets
0.41Moderate
sensorineural hearing lossOpen Targets
0.40Moderate
Non-syndromic genetic deafnessOpen Targets
0.37Weak
Rare genetic deafnessOpen Targets
0.36Weak
familial dilated cardiomyopathyOpen Targets
0.34Weak
genetic disorderOpen Targets
0.34Weak
cardiac arrhythmiaOpen Targets
0.34Weak
Cardiomyopathy, dilated, 1JUniProt
Deafness, autosomal dominant, 10UniProt
Pathogenic Variants87
NM_004100.5(EYA4):c.1759C>T (p.Arg587Ter)Pathogenic
not provided|Autosomal dominant nonsyndromic hearing loss 10|Dilated cardiomyopathy 1J|Monogenic hearing loss
β˜…β˜…β˜†β˜†2025β†’ Residue 587
NM_004100.5(EYA4):c.475_478del (p.Thr159fs)Pathogenic
not provided|Dilated cardiomyopathy 1J
β˜…β˜…β˜†β˜†2025β†’ Residue 159
NM_004100.5(EYA4):c.243del (p.Trp81fs)Pathogenic
Dilated cardiomyopathy 1J|Dilated cardiomyopathy 1J;Autosomal dominant nonsyndromic hearing loss 10
β˜…β˜…β˜†β˜†2025β†’ Residue 81
NM_004100.5(EYA4):c.61del (p.Val21fs)Pathogenic
Dilated cardiomyopathy 1J|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 21
NM_004100.5(EYA4):c.1241_1248del (p.Phe414fs)Pathogenic
EYA4-related disorder|Dilated cardiomyopathy 1J
β˜…β˜…β˜†β˜†2025β†’ Residue 414
NM_004100.5(EYA4):c.580G>A (p.Asp194Asn)Pathogenic
not provided|Dilated cardiomyopathy 1J
β˜…β˜…β˜†β˜†2024β†’ Residue 194
NM_004100.5(EYA4):c.1739-1G>ALikely pathogenic
Dilated cardiomyopathy 1J|Cardiovascular phenotype|Rare genetic deafness|EYA4-related disorder
β˜…β˜…β˜†β˜†2024
NM_004100.5(EYA4):c.1341-2A>GLikely pathogenic
not provided|Dilated cardiomyopathy 1J
β˜…β˜…β˜†β˜†2023
NM_004100.5(EYA4):c.1537C>T (p.Gln513Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 513
NM_004100.5(EYA4):c.1085del (p.Pro362fs)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 362
NM_004100.5(EYA4):c.624_625insA (p.Ser209fs)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 209
NM_004100.5(EYA4):c.1410dup (p.Val471fs)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 471
NM_004100.5(EYA4):c.520C>T (p.Gln174Ter)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 174
NM_004100.5(EYA4):c.517C>T (p.Gln173Ter)Pathogenic
Autosomal dominant nonsyndromic hearing loss 10
β˜…β˜†β˜†β˜†2025β†’ Residue 173
NM_004100.5(EYA4):c.1014del (p.Asp340fs)Pathogenic
Primary familial dilated cardiomyopathy
β˜…β˜†β˜†β˜†2025β†’ Residue 340
NM_004100.5(EYA4):c.970+1G>ALikely pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025
NM_004100.5(EYA4):c.580+1G>ALikely pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025
NM_004100.5(EYA4):c.1472del (p.Leu491fs)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 491
NM_004100.5(EYA4):c.1574G>A (p.Trp525Ter)Pathogenic
Dilated cardiomyopathy 1J
β˜…β˜†β˜†β˜†2025β†’ Residue 525
NM_004100.5(EYA4):c.1269dup (p.Asn424Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 424
View on ClinVar β†—
Related Genes
SIX1Protein interaction90%RBM20Protein interaction81%TCF21Protein interaction81%SIX4Protein interaction80%SIX2Protein interaction80%NLRX1Protein interaction79%
Tissue Expression6 tissues
Brain
100%
Heart
96%
Lung
20%
Ovary
9%
Liver
1%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
EYA4SIX1RBM20TCF21SIX4SIX2NLRX1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt O95677
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.54Moderately Constrained
pLIβ“˜
0.86Intermediate
Observed/Expected LoF0.37 [0.26–0.54]
RankingsWhere EYA4 stands among ~20K protein-coding genes
  • #4,980of 20,598
    Most Researched96 Β· top quartile
  • #864of 5,498
    Most Pathogenic Variants87 Β· top quartile
  • #3,368of 17,882
    Most Constrained (LOEUF)0.54 Β· top quartile
Genes detectedEYA4
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
PMID: 20301486
1.00
2
Delineating the tumour-regulatory roles of EYA4.
PMID: 36849065
Biochem Pharmacol Β· 2023
0.90
3
EYA4 gene functions as a prognostic marker and inhibits the growth of intrahepatic cholangiocarcinoma.
PMID: 27469137
Chin J Cancer Β· 2016
0.80
4
EYA4 functions as tumor suppressor gene and prognostic marker in pancreatic ductal adenocarcinoma through Ξ²-catenin/ID2 pathway.
PMID: 27378242
Cancer Lett Β· 2016
0.70
5
Profiling the proximal proteome of the activated ΞΌ-opioid receptor.
PMID: 38528119
Nat Chem Biol Β· 2024
0.60