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GeneE
50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
F5
coagulation factor V
Chromosome 1 Β· 1q24.2
NCBI Gene: 2153Ensembl: ENSG00000198734.13HGNC: HGNC:3542UniProt: P12259
1,344PubMed Papers
25Diseases
1Drugs
109Pathogenic Variants
RESEARCH IMPACT
Highly StudiedTrendingVariant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
membraneextracellular vesicleprotein bindingGO:0005615thrombophilia due to activated protein C resistancecongenital factor V deficiencyfactor V deficiencyIschemic stroke
✦AI Summary

F5 encodes coagulation factor V, a central regulator of hemostasis that serves as a critical cofactor for factor Xa in the prothrombinase complex, enabling prothrombin activation to thrombin. The protein is synthesized in the endoplasmic reticulum and transported via COPII-coated vesicles to the Golgi, ultimately secreted into plasma and stored in platelet alpha granules for hemostatic responses. Loss-of-function mutations cause factor V deficiency, a rare bleeding disorder. Conversely, the F5 Leiden variant (C506G polymorphism) confers activated protein C resistance, a major thrombophilia predisposing to venous thrombosis and recurrent pregnancy loss. This gain-of-function mutation prevents normal degradation of activated factor V, causing excessive thrombin generation. F5 polymorphisms have been investigated in obesity-related thrombotic risk, though associations remain unclear 1. Emerging evidence suggests F5 has roles beyond classical coagulation. Recent bioinformatics studies identified F5 as a diagnostic biomarker in severe asthma, associated with immune cell infiltration patterns 2. Additionally, F5 expression has been noted in cancer-associated fibroblast subpopulations within hepatocellular carcinoma tumors, potentially supporting cancer stem cell survival 3. Clinically, F5 testing is essential for thrombophilia screening, particularly in patients with unprovoked venous thromboembolism, recurrent miscarriage, or family histories of thrombosis. Anticoagulation management differs between factor V deficiency and thrombophilia, making accurate diagnosis critical for patient care.

Sources cited
1
F5 C>G polymorphism (rs6427196) analysis in obesity and thrombosis risk assessment
PMID: 27999448
2
F5 identified as diagnostic gene biomarker in severe asthma with association to immune cell infiltration
PMID: 39531229
3
F5-CAF fibroblast subpopulation in hepatocellular carcinoma associated with cancer stem cells and poor prognosis
PMID: 39138551
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜25
thrombophilia due to activated protein C resistanceOpen Targets
0.80Strong
congenital factor V deficiencyOpen Targets
0.77Strong
factor V deficiencyOpen Targets
0.77Strong
Ischemic strokeOpen Targets
0.67Moderate
strokeOpen Targets
0.62Moderate
hepatic vein thrombosisOpen Targets
0.62Moderate
habitual abortionOpen Targets
0.62Moderate
venous thromboembolismOpen Targets
0.59Moderate
Venous thrombosisOpen Targets
0.58Moderate
ThromboembolismOpen Targets
0.55Moderate
pulmonary embolismOpen Targets
0.55Moderate
SepsisOpen Targets
0.55Moderate
deep vein thrombosisOpen Targets
0.55Moderate
PhlebitisOpen Targets
0.54Moderate
ThrombophlebitisOpen Targets
0.53Moderate
cardiovascular diseaseOpen Targets
0.52Moderate
Iron deficiency anemiaOpen Targets
0.50Moderate
MenorrhagiaOpen Targets
0.49Moderate
blood coagulation diseaseOpen Targets
0.49Moderate
thrombophiliaOpen Targets
0.48Moderate
Budd-Chiari syndromeUniProt
Factor V deficiencyUniProt
Ischemic strokeUniProt
Pregnancy loss, recurrent, 1UniProt
Thrombophilia due to activated protein C resistanceUniProt
Pathogenic Variants109
NM_000130.5(F5):c.286G>C (p.Asp96His)Pathogenic
Congenital factor V deficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 96
NM_000130.5(F5):c.5037dup (p.Ser1680fs)Pathogenic
not provided|Congenital factor V deficiency|Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome;Congenital factor V deficiency;Ischemic stroke;Pregnancy loss, recurrent, susceptibility to, 1
β˜…β˜…β˜†β˜†2025β†’ Residue 1680
NM_000130.5(F5):c.1297-2A>GPathogenic
Factor V deficiency|Congenital factor V deficiency
β˜…β˜…β˜†β˜†2025
NM_000130.5(F5):c.6658G>T (p.Gly2220Cys)Likely pathogenic
Congenital factor V deficiency|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 2220
NM_000130.5(F5):c.5403dup (p.Ser1802fs)Pathogenic
not provided|Congenital factor V deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 1802
NM_000130.5(F5):c.1258G>T (p.Gly420Cys)Pathogenic
Congenital factor V deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 420
NM_000130.5(F5):c.4962_4971+3delLikely pathogenic
Congenital factor V deficiency|Congenital factor V deficiency;Pregnancy loss, recurrent, susceptibility to, 1;Ischemic stroke;Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome
β˜…β˜…β˜†β˜†2024
NM_000130.5(F5):c.4900C>T (p.Arg1634Ter)Pathogenic
Congenital factor V deficiency|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1634
NM_000130.5(F5):c.5189A>G (p.Tyr1730Cys)Pathogenic
Factor V deficiency|Congenital factor V deficiency|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1730
NM_000130.5(F5):c.5453del (p.Leu1818fs)Pathogenic
Congenital factor V deficiency|Congenital factor V deficiency;Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome;Ischemic stroke;Pregnancy loss, recurrent, susceptibility to, 1
β˜…β˜…β˜†β˜†2024β†’ Residue 1818
NM_000130.5(F5):c.2021del (p.Lys674fs)Pathogenic
Congenital factor V deficiency|Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome;Congenital factor V deficiency;Pregnancy loss, recurrent, susceptibility to, 1;Ischemic stroke
β˜…β˜…β˜†β˜†2024β†’ Residue 674
NM_000130.5(F5):c.3088C>T (p.Arg1030Ter)Pathogenic
Congenital factor V deficiency|F5-related disorder|Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome;Ischemic stroke;Pregnancy loss, recurrent, susceptibility to, 1;Congenital factor V deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 1030
NM_000130.5(F5):c.1830_1831dup (p.His611fs)Pathogenic
Factor V deficiency|Thrombophilia due to activated protein C resistance|Pregnancy loss, recurrent, susceptibility to, 1;Congenital factor V deficiency;Ischemic stroke;Thrombophilia due to activated protein C resistance;Budd-Chiari syndrome
β˜…β˜…β˜†β˜†2024β†’ Residue 611
NM_000130.5(F5):c.4861C>T (p.Arg1621Ter)Pathogenic
Congenital factor V deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 1621
NM_000130.5(F5):c.3799del (p.Leu1267fs)Pathogenic
Congenital factor V deficiency|Pregnancy loss, recurrent, susceptibility to, 1
β˜…β˜…β˜†β˜†2023β†’ Residue 1267
NM_000130.5(F5):c.2862del (p.Ser955fs)Pathogenic
Congenital factor V deficiency|Factor V deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 955
NM_000130.5(F5):c.2218C>T (p.Arg740Ter)Pathogenic
Factor V deficiency|Congenital factor V deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 740
NM_000130.5(F5):c.436C>T (p.Arg146Ter)Pathogenic
Congenital factor V deficiency
β˜…β˜…β˜†β˜†2022β†’ Residue 146
NM_000130.5(F5):c.2539del (p.Ile847fs)Pathogenic
Factor V deficiency|Congenital factor V deficiency
β˜…β˜…β˜†β˜†2022β†’ Residue 847
NM_000130.5(F5):c.6584dup (p.Ile2196fs)Likely pathogenic
Thrombophilia due to activated protein C resistance
β˜…β˜†β˜†β˜†2025β†’ Residue 2196
View on ClinVar β†—
Drug Targets1
DROTRECOGIN ALFA (ACTIVATED)Approved
Coagulation factor V inhibitor
Recurrent thrombophlebitis
Related Genes
MCFD2Protein interaction100%F8Protein interaction100%F7Protein interaction98%SERPINE2Protein interaction98%F11Protein interaction97%F10Protein interaction95%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
8%
Heart
7%
Brain
4%
Lung
3%
Ovary
0%
Gene Interaction Network
Click a node to explore
F5MCFD2F8F7SERPINE2F11F10
PROTEIN STRUCTURE
Preparing viewer…
PDB3P6Z Β· 1.70 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.70LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.61 [0.53–0.70]
RankingsWhere F5 stands among ~20K protein-coding genes
  • #99of 20,598
    Most Researched1,344 Β· top 1%
  • #714of 1,025
    FDA-Approved Drug Targets1
  • #714of 5,498
    Most Pathogenic Variants109 Β· top quartile
  • #5,367of 17,882
    Most Constrained (LOEUF)0.70
Genes detectedF5
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
Gluteal muscle activation during common therapeutic exercises.
PMID: 19574661
J Orthop Sports Phys Ther Β· 2009
1.00
2
A systematic review and meta-analysis of the epidemiology of pathogenic Escherichia coli of calves and the role of calves as reservoirs for human pathogenic E. coli.
PMID: 25815276
Front Cell Infect Microbiol Β· 2015
0.90
3
Psychosis in Alzheimer Disease and Elevations in Disease-Relevant Biomarkers.
PMID: 38922609
JAMA Psychiatry Β· 2024
0.88
4
Spatial multiomics reveals a subpopulation of fibroblasts associated with cancer stemness in human hepatocellular carcinoma.
PMID: 39138551
Genome Med Β· 2024
0.80
5
The joint association between F5 gene polymorphisms and maternal smoking during pregnancy on preterm delivery.
PMID: 19020903
Hum Genet Β· 2009
0.80