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5 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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FASTKD3
FAST kinase domains 3
Chromosome 5 · 5p15.31
NCBI Gene: 79072Ensembl: ENSG00000124279.12HGNC: HGNC:28758UniProt: D6RAR6
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingmitochondrial respiratory chain complex IV assemblyregulation of mitochondrial mRNA stabilitynon-Hodgkins lymphomalymphatic system cancerneurodegenerative diseasebalanoposthitis
✦AI Summary

FASTKD3 is a mitochondrial RNA-binding protein essential for regulating mitochondrial gene expression and respiration. Functionally, FASTKD3 stabilizes specific mature mitochondrial mRNAs (MT-ND2, MT-ND3, MT-CYTB, MT-CO2, and MT-ATP8/6) by increasing their steady-state levels and half-lives 1. Additionally, FASTKD3 promotes MT-CO1 mRNA translation and facilitates mitochondrial complex IV assembly and activity 1. The protein contains a conserved RNA-binding domain (RAP domain) required for its mRNA stability function 1. Mechanistically, FASTKD3 knockdown severely impairs basal and stress-induced mitochondrial oxygen consumption without disrupting respiratory chain complex assembly, suggesting it functionally couples mitochondrial protein synthesis to respiration 2. Unlike other FASTK family members, FASTKD3 does not localize to mitochondrial RNA granules, indicating a distinct subcellular function 1. Disease relevance includes potential involvement in cancer pathology, with FASTKD3 amplifications identified in over 8% of lung cancers 3. Additionally, FASTKD3 transcriptomic disruption correlates with microbial dysbiosis and epigenetic alterations in HIV-associated COPD pathogenesis 4. These findings position FASTKD3 as a critical regulator of mitochondrial bioenergetics with implications for metabolic diseases and malignancy.

Sources cited
1
FASTKD3 is essential for mitochondrial respiration; knockdown reduces oxygen consumption and FASTKD3 interacts with respiratory and translation machinery components
PMID: 20869947
2
FASTKD3 increases stability of ND2, ND3, CYTB, COX2, ATP8/6 mRNAs and promotes COX1 translation; RAP domain is required for mRNA stability function; FASTKD3 does not localize to mitochondrial RNA granules
PMID: 27789713
3
FASTKD3 amplifications occur in over 8% of lung cancers; FASTK family proteins are altered in various cancer types
PMID: 34768773
4
FASTKD3 gene expression disruptions correlate with microbial dysbiosis and epigenetic alterations in HIV-associated COPD
PMID: 37143066
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
lymphatic system cancerOpen Targets
0.29Weak
non-Hodgkins lymphomaOpen Targets
0.29Weak
neurodegenerative diseaseOpen Targets
0.25Weak
balanoposthitisOpen Targets
0.23Weak
adverse effectOpen Targets
0.22Weak
Precordial painOpen Targets
0.22Weak
spermatoceleOpen Targets
0.22Weak
ulcerative colitisOpen Targets
0.21Weak
response to stimulusOpen Targets
0.19Weak
phototoxic dermatitisOpen Targets
0.19Weak
Abnormality of limbsOpen Targets
0.19Weak
benign chondrogenic neoplasmOpen Targets
0.18Weak
Genetic renal or urinary tract malformationOpen Targets
0.14Weak
metabolic diseaseOpen Targets
0.12Weak
smoking initiationOpen Targets
0.05Suggestive
poisoningOpen Targets
0.04Suggestive
corneal neovascularizationOpen Targets
0.04Suggestive
bone remodeling diseaseOpen Targets
0.03Suggestive
placental retentionOpen Targets
0.03Suggestive
response to xenobiotic stimulusOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MRPS22Protein interaction98%MRPS31Protein interaction86%PTCD1Protein interaction86%PNPT1Protein interaction84%DHX30Protein interaction77%IARS2Protein interaction76%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
92%
Brain
73%
Heart
64%
Ovary
57%
Lung
49%
Gene Interaction Network
Click a node to explore
FASTKD3MRPS22MRPS31PTCD1PNPT1DHX30IARS2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q14CZ7
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.14LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.87 [0.67–1.14]
RankingsWhere FASTKD3 stands among ~20K protein-coding genes
  • #12,979of 20,598
    Most Researched25
  • #11,820of 17,882
    Most Constrained (LOEUF)1.14
Genes detectedFASTKD3
Sources retrieved5 papers
Response time—
📄 Sources
5
1
Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration.
PMID: 20869947
Biochem Biophys Res Commun · 2010
1.00
2
Microbial dysbiosis and the host airway epithelial response: insights into HIV-associated COPD using multi'omics profiling.
PMID: 37143066
Respir Res · 2023
0.80
3
Role of FAST Kinase Domains 3 (FASTKD3) in Post-transcriptional Regulation of Mitochondrial Gene Expression.
PMID: 27789713
J Biol Chem · 2016
0.60
4
Systematic Analysis of FASTK Gene Family Alterations in Cancer.
PMID: 34768773
Int J Mol Sci · 2021
0.40
5
The FASTK family of proteins: emerging regulators of mitochondrial RNA biology.
PMID: 29036396
Nucleic Acids Res · 2017
0.20