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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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FBXO4
F-box protein 4
Chromosome 5 · 5p13.1
NCBI Gene: 26272Ensembl: ENSG00000151876.13HGNC: HGNC:13583UniProt: B3KNA0
65PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ubiquitin-protein transferase activityprotein bindingprotein homodimerization activitypositive regulation of telomere maintenance via telomeraseAbnormality of the skeletal systematrial fibrillationhealth study participationovarian neoplasm
✦AI Summary

FBXO4 (F-box protein 4) functions as a substrate recognition component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, mediating the ubiquitination and subsequent proteasomal degradation of multiple target proteins 1. The protein operates through formation of a homodimeric SCF complex structure that facilitates substrate recognition and degradation 1. Key substrates include cyclin D1, FXR1, hnRNPK, β-catenin, and MCL-1, which regulate critical cellular processes including cell cycle progression, apoptosis, and differentiation 234. FBXO4 functions as a tumor suppressor by restricting oncogenic activities: it limits hnRNPK-mediated translation of oncogenes like c-Myc through K63-linked polyubiquitination 3, degrades FXR1 to suppress tumorigenesis in head and neck squamous cell carcinoma 2, and inhibits Wnt/β-catenin signaling by degrading β-catenin 4. Clinical significance is evident as FBXO4 is downregulated in various cancers including papillary thyroid cancer, where its restoration suppresses migration, invasion, and promotes apoptosis 5. Additionally, FBXO4 regulates HPV E6 oncoprotein stability and can induce p53-dependent cell death in HPV-positive cervical cancer cells 6. The protein's tumor suppressor functions make it a potential therapeutic target for cancer treatment 7.

Sources cited
1
FBXO4 forms homodimeric SCF E3 ubiquitin ligase complex structure
PMID: 39406020
2
FBXO4 restricts hnRNPK oncogenic activity via K63-linked polyubiquitination and limits c-Myc translation
PMID: 36329064
3
FBXO4 degrades FXR1 substrate and suppresses tumorigenesis in head and neck squamous cell carcinoma
PMID: 29142209
4
FBXO4 degrades β-catenin and inhibits Wnt signaling pathway, affecting muscle cell differentiation
PMID: 40599691
5
FBXO4 is downregulated in papillary thyroid cancer and suppresses migration, invasion while promoting apoptosis
PMID: 33285173
6
FBXO4 regulates HPV E6 oncoprotein stability and induces p53-dependent cell death
PMID: 39688415
7
FBXO4 functions as tumor suppressor with potential therapeutic value
PMID: 35565262
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.25Weak
atrial fibrillationOpen Targets
0.24Weak
health study participationOpen Targets
0.12Weak
ovarian neoplasmOpen Targets
0.11Weak
Subdural hemorrhageOpen Targets
0.11Weak
alcohol drinkingOpen Targets
0.10Suggestive
blood coagulation diseaseOpen Targets
0.09Suggestive
Li-Fraumeni syndromeOpen Targets
0.07Suggestive
Hereditary breast and ovarian cancer syndromeOpen Targets
0.06Suggestive
familial adenomatous polyposis 3Open Targets
0.06Suggestive
attenuated familial adenomatous polyposisOpen Targets
0.06Suggestive
myofibromatosis, infantile, 1Open Targets
0.06Suggestive
reticulum cell sarcomaOpen Targets
0.05Suggestive
NUT midline carcinomaOpen Targets
0.05Suggestive
tumor predisposition syndrome 2Open Targets
0.05Suggestive
familial atypical multiple mole melanoma syndromeOpen Targets
0.05Suggestive
hereditary breast ovarian cancer syndromeOpen Targets
0.05Suggestive
hyperplastic polyposis syndromeOpen Targets
0.05Suggestive
Lynch syndromeOpen Targets
0.05Suggestive
hereditary leiomyomatosis and renal cell cancerOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SKP1Protein interaction100%CUL1Protein interaction100%BTRCProtein interaction100%FBXL3Protein interaction100%FBXO2Protein interaction100%FBXW7Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
76%
Ovary
61%
Lung
54%
Brain
54%
Heart
52%
Gene Interaction Network
Click a node to explore
FBXO4SKP1CUL1BTRCFBXL3FBXO2FBXW7
PROTEIN STRUCTURE
Preparing viewer…
PDB3L82 · 2.40 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.19LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.88 [0.66–1.19]
RankingsWhere FBXO4 stands among ~20K protein-coding genes
  • #7,168of 20,598
    Most Researched65
  • #12,450of 17,882
    Most Constrained (LOEUF)1.19
Genes detectedFBXO4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Tumor suppressor mediated ubiquitylation of hnRNPK is a barrier to oncogenic translation.
PMID: 36329064
Nat Commun · 2022
1.00
2
F-Box protein 4 inhibits progression of papillary thyroid cancer.
PMID: 33285173
Steroids · 2021
0.90
3
The E3 Ubiquitin Ligase Fbxo4 Functions as a Tumor Suppressor: Its Biological Importance and Therapeutic Perspectives.
PMID: 35565262
Cancers (Basel) · 2022
0.80
4
IFNα/JAK/STAT1 Axis-Induced FBXO4 Modulates Muscle Cell Differentiation via β-Catenin Degradation in Dermatomyositis.
PMID: 40599691
J Inflamm Res · 2025
0.70
5
Regulation of human papillomavirus E6 oncoprotein function via a novel ubiquitin ligase FBXO4.
PMID: 39688415
mBio · 2025
0.60