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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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FOXQ1
forkhead box Q1
Chromosome 6 · 6p25.3
NCBI Gene: 94234Ensembl: ENSG00000164379.7HGNC: HGNC:20951UniProt: Q9C009
86PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
sequence-specific double-stranded DNA bindingcell differentiationnucleuschromatinneurodegenerative diseaseopen-angle glaucomastrokeosteonecrosis
✦AI Summary

FOXQ1 is a forkhead box transcription factor located on chromosome 6.3 that functions as a sequence-specific DNA-binding regulator of gene expression 1. The gene encodes a 403-amino acid protein with two putative transcriptional activation domains and is predominantly expressed in epithelial tissues including stomach, trachea, bladder, and salivary gland 1. FOXQ1 serves as a major regulator of epithelial-mesenchymal transition (EMT), a critical developmental process dysregulated in cancer 2. Mechanistically, FOXQ1 promotes cancer progression by transcriptionally activating downstream targets: in pancreatic cancer, FOXQ1 upregulates LDHA to enhance aerobic glycolysis, promoting cell proliferation, stemness, invasion, and metastasis 3; in colorectal cancer, FOXQ1 regulates CCL2 production within a JAK2/STAT3/miR-506-3p/FoxQ1 regulatory axis that recruits tumor-associated macrophages 4. During pancreatic cancer development, FOXQ1 is expressed in acinar metaplastic cells that precede malignant transformation 5. Beyond cancer, FOXQ1 expression is genetically associated with lacunar stroke risk through the FOXF2-FOXQ1 locus 6, and FOXQ1 protects against sepsis-induced acute kidney injury by activating CREB5 and suppressing NF-κB signaling 7. High FOXQ1 expression constitutes an independent prognostic factor for poor survival in gastric and colorectal cancers, making it a potential therapeutic target 2.

Sources cited
1
FOXQ1 encodes a 403-amino acid forkhead transcription factor with conserved DNA-binding domain, located on chromosome 6p23-25, expressed predominantly in stomach, trachea, bladder, and salivary gland
PMID: 11747606
2
FOXQ1 is a major regulator of epithelial-to-mesenchymal transition and tumor metastasis, with elevated expression serving as an independent prognostic factor for worse overall survival in gastric and colorectal cancer
PMID: 39777582
3
FOXQ1 promotes pancreatic cancer cell proliferation, tumor stemness, invasion, and metastasis by transcriptionally upregulating LDHA to enhance aerobic glycolysis
PMID: 37875474
4
FOXQ1 is regulated by the JAK2/STAT3/miR-506-3p axis in colorectal cancer and promotes CCL2 production to recruit tumor-associated macrophages and enhance metastasis
PMID: 30927925
5
FOXQ1 is expressed in acinar metaplastic cells during early pancreatic cancer development and progression from preinvasive lesions to tumors
PMID: 32908137
6
FOXQ1 locus (FOXF2-FOXQ1) is genetically associated with lacunar stroke risk
PMID: 33773637
7
FOXQ1, stabilized by USP10 deubiquitination, protects against sepsis-induced acute kidney injury by transcriptionally activating CREB5 and suppressing NF-κB signaling
PMID: 38960057
8
FOXQ1 belongs to the forkhead box family of class 1 transcription factors; FOX family deregulation leads to congenital disorders, diabetes, or carcinogenesis
PMID: 15492844
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.49Moderate
open-angle glaucomaOpen Targets
0.37Weak
strokeOpen Targets
0.27Weak
osteonecrosisOpen Targets
0.26Weak
VertigoOpen Targets
0.26Weak
breast carcinomaOpen Targets
0.24Weak
cutaneous melanomaOpen Targets
0.20Weak
Abruptio PlacentaeOpen Targets
0.19Weak
enteritisOpen Targets
0.19Weak
benign neoplasmOpen Targets
0.18Weak
Ischemic strokeOpen Targets
0.17Weak
Abnormality of limbsOpen Targets
0.17Weak
central nervous system infectionOpen Targets
0.17Weak
anemiaOpen Targets
0.16Weak
placenta praeviaOpen Targets
0.16Weak
biliary tract diseaseOpen Targets
0.15Weak
vertebral column disorderOpen Targets
0.14Weak
ankylosing spondylitisOpen Targets
0.14Weak
response to bronchodilatorOpen Targets
0.13Weak
flatulenceOpen Targets
0.13Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FOXD4Shared pathway100%FOXD2Shared pathway100%FOXL3Shared pathway100%FOXD4L5Shared pathway100%FOXD4L6Shared pathway100%FOXB2Shared pathway100%
Tissue Expression6 tissues
Lung
100%
Liver
66%
Brain
38%
Bone Marrow
3%
Ovary
2%
Heart
0%
Gene Interaction Network
Click a node to explore
FOXQ1FOXD4FOXD2FOXL3FOXD4L5FOXD4L6FOXB2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9C009
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.94LoF Tolerant
pLIⓘ
0.11Tolerant
Observed/Expected LoF3.57 [0.39–1.94]
RankingsWhere FOXQ1 stands among ~20K protein-coding genes
  • #5,539of 20,598
    Most Researched86
  • #17,551of 17,882
    Most Constrained (LOEUF)1.94
Genes detectedFOXQ1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Human FOX gene family (Review).
PMID: 15492844
Int J Oncol · 2004
1.00
2
FOXQ1 promotes pancreatic cancer cell proliferation, tumor stemness, invasion and metastasis through regulation of LDHA-mediated aerobic glycolysis.
PMID: 37875474
Cell Death Dis · 2023
0.90
3
Crosstalk between cancer cells and tumor associated macrophages is required for mesenchymal circulating tumor cell-mediated colorectal cancer metastasis.
PMID: 30927925
Mol Cancer · 2019
0.80
4
Single-cell transcriptomes of pancreatic preinvasive lesions and cancer reveal acinar metaplastic cells' heterogeneity.
PMID: 32908137
Nat Commun · 2020
0.70
5
The transcription factor FOXQ1 in cancer.
PMID: 39777582
Cancer Metastasis Rev · 2025
0.60