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50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
FTO
FTO alpha-ketoglutarate dependent dioxygenase
Chromosome 16 Β· 16q12.2
NCBI Gene: 79068Ensembl: ENSG00000140718.22HGNC: HGNC:24678UniProt: A0A1B0GTC5
1,051PubMed Papers
22Diseases
1Drugs
3Pathogenic Variants
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
Clinical TrialsOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
ferrous iron bindingsnRNA processingRNA repairmRNA destabilizationlethal polymalformative syndrome, Boissel typeobesitytype 2 diabetes mellitusdiabetes mellitus
✦AI Summary

FTO is an RNA N6-methyladenosine (m6A) demethylase that serves dual roles in metabolism and cancer biology. Primary Function: FTO catalyzes oxidative demethylation of m6A, the most prevalent internal mRNA modification in eukaryotes, affecting mRNA stability and expression 1. It also demethylates m6A in tRNAs and snRNAs, including the m6A cap structure (m6A(m)) 2. Mechanism: FTO's enzymatic activity regulates adipogenesis and energy homeostasis by modulating expression of metabolic genes 3. In disease contexts, FTO promotes tumorigenesis through m6A demethylation of oncogenic targets including MYC and HSF1, enhancing their expression in acute myeloid leukemia and multiple myeloma 45. Disease Relevance: Genome-wide association studies identified FTO polymorphisms associated with obesity and multiple cancers including breast, pancreatic, and endometrial cancer 3. FTO upregulation drives progression in clear cell renal cell carcinoma and hepatocellular carcinoma through m6A-mediated pathways 67. FTO also impacts ferroptosis regulation, influencing both cardiotoxicity and NAFLD pathogenesis 89. Clinical Significance: FTO inhibitors (FB23-2) demonstrate therapeutic potential in AML and ccRCC xenograft models, suggesting FTO as a druggable oncology target 106.

Sources cited
1
Primary Function: FTO catalyzes oxidative demethylation of m6A, the most prevalent internal mRNA modification in eukaryotes, affecting mRNA stability and expression .
PMID: 22002720
2
It also demethylates m6A in tRNAs and snRNAs, including the m6A cap structure (m6A(m)) .
PMID: 30197295
3
Mechanism: FTO's enzymatic activity regulates adipogenesis and energy homeostasis by modulating expression of metabolic genes .
PMID: 35409166
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜22
lethal polymalformative syndrome, Boissel typeOpen Targets
0.71Strong
obesityOpen Targets
0.60Moderate
type 2 diabetes mellitusOpen Targets
0.51Moderate
diabetes mellitusOpen Targets
0.51Moderate
hypertensionOpen Targets
0.49Moderate
atrial fibrillationOpen Targets
0.48Moderate
breast cancerOpen Targets
0.48Moderate
heart failureOpen Targets
0.47Moderate
Abnormality of the skeletal systemOpen Targets
0.47Moderate
sleep apneaOpen Targets
0.47Moderate
osteoarthritisOpen Targets
0.46Moderate
osteoarthritis, hipOpen Targets
0.46Moderate
osteoarthritis, kneeOpen Targets
0.46Moderate
chronic kidney diseaseOpen Targets
0.46Moderate
breast carcinomaOpen Targets
0.46Moderate
morbid obesityOpen Targets
0.45Moderate
obstructive sleep apneaOpen Targets
0.45Moderate
congestive heart failureOpen Targets
0.45Moderate
osteomyelitisOpen Targets
0.45Moderate
essential hypertensionOpen Targets
0.44Moderate
Growth retardation, developmental delay, and facial dysmorphismUniProt
ObesityUniProt
Pathogenic Variants3
NM_001080432.3(FTO):c.947G>A (p.Arg316Gln)Likely pathogenic
Lethal polymalformative syndrome, Boissel type|not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 316
NM_001080432.3(FTO):c.124-1G>ALikely pathogenic
Body mass index quantitative trait locus 14
β˜…β˜†β˜†β˜†2024
NM_001080432.3(FTO):c.956C>T (p.Ser319Phe)Pathogenic
Lethal polymalformative syndrome, Boissel type
β˜†β˜†β˜†β˜†2015β†’ Residue 319
View on ClinVar β†—
Drug Targets1
BISANTRENEPhase II
Alpha-ketoglutarate-dependent dioxygenase FTO inhibitor
Related Genes
ALKBH3Protein interaction99%YTHDF2Protein interaction96%TMEM18Protein interaction96%ALKBH8Protein interaction95%NEGR1Protein interaction93%SLC30A8Protein interaction93%
Tissue Expression6 tissues
Brain
100%
Heart
45%
Ovary
27%
Lung
23%
Liver
15%
Bone Marrow
9%
Gene Interaction Network
Click a node to explore
FTOALKBH3YTHDF2TMEM18ALKBH8NEGR1SLC30A8
PROTEIN STRUCTURE
Preparing viewer…
PDB4IE5 Β· 1.95 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.92LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.71 [0.56–0.92]
RankingsWhere FTO stands among ~20K protein-coding genes
  • #147of 20,598
    Most Researched1,051 Β· top 1%
  • #3,886of 5,498
    Most Pathogenic Variants3
  • #8,496of 17,882
    Most Constrained (LOEUF)0.92
Genes detectedFTO
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
FTO m6A Demethylase in Obesity and Cancer: Implications and Underlying Molecular Mechanisms.
PMID: 35409166
Int J Mol Sci Β· 2022
1.00
2
Arbutin alleviates fatty liver by inhibiting ferroptosis via FTO/SLC7A11 pathway.
PMID: 37984229
Redox Biol Β· 2023
0.90
3
Emerging Role and Mechanism of the
PMID: 37238719
Biomolecules Β· 2023
0.84
4
m6A eraser FTO impairs gemcitabine resistance in pancreatic cancer through influencing NEDD4 mRNA stability by regulating the PTEN/PI3K/AKT pathway.
PMID: 37605223
J Exp Clin Cancer Res Β· 2023
0.82
5
The m
PMID: 41191778
Sci Transl Med Β· 2025
0.80