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GeneE
10 sources retrieved ยท Most recent: April 2026 ยท Index updated 15 days ago
โ“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GABRA2
gamma-aminobutyric acid type A receptor subunit alpha2
Chromosome 4 ยท 4p12
NCBI Gene: 2555Ensembl: ENSG00000151834.16HGNC: HGNC:4076UniProt: E9PBQ7
123PubMed Papers
21Diseases
75Drugs
20Pathogenic Variants
FUNCTIONAL ROLE
Ion ChannelReceptorTransporter
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
โœ“ Experimental GO Evidenceโœ“ Swiss-Prot Reviewed
transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialGABA-A receptor complexsynaptic vesicle membranechloride transmembrane transportalcohol dependencegenetic developmental and epileptic encephalopathySeizureepilepsy
โœฆAI Summary

GABRA2 encodes the alpha-2 subunit of GABA(A) receptors, which are ligand-gated chloride channels that mediate fast synaptic inhibition in the brain 1. When activated by GABA, the major inhibitory neurotransmitter, these heteropentameric receptors allow chloride influx into neurons, hyperpolarizing the membrane and reducing action potential generation 1. The alpha-2 subunit exhibits synaptogenic activity with beta-2 subunits, contributing to synaptic contact formation. GABRA2 undergoes complex alternative splicing and promoter usage, generating multiple isoforms with naturally occurring haplotypes exhibiting different promoter activities, suggesting regulatory variation affects gene expression 2. Mutations in GABRA2 are associated with developmental and epileptic encephalopathy 78, as genetic variations in GABA receptor genes lead to epilepsy primarily through downregulating receptor expression and reducing GABA-evoked potentials 3. Beyond epilepsy, GABRA2 variants show robust associations with alcohol use disorder, with specific single-nucleotide polymorphisms (rs567926, rs279858) demonstrating significant risk across multiple meta-analyses 4. Evidence indicates gene-environment interactions, where GABRA2 risk genotypes interact with marital status and trauma exposure to influence alcohol dependence and posttraumatic stress disorder development 56. These findings establish GABRA2 as a critical neurobiological candidate gene affecting multiple neuropsychiatric phenotypes through GABAergic regulation.

Sources cited
1
GABRA2 encodes alpha subunit of GABA(A) receptors; chloride influx reduces neuronal excitability
PMID: 10449790
2
GABRA2 exhibits complex alternative splicing and promoter usage; haplotype variants differ in promoter activity
PMID: 15950776
3
GABRA2 mutations cause epilepsy by downregulating receptor expression and reducing GABA-evoked potentials
PMID: 35850019
4
GABRA2 variants rs567926 and rs279858 show strong association with alcohol dependence in meta-analyses
PMID: 24136292
5
GABRA2 interacts with marital status on alcohol dependence risk; shows gene-environment correlation and interaction
PMID: 16562401
6
GABRA2 polymorphism interacts with traumatic events to influence PTSD development
PMID: 23062450
Disease Associationsโ“˜21
alcohol dependenceOpen Targets
0.69Moderate
genetic developmental and epileptic encephalopathyOpen Targets
0.66Moderate
SeizureOpen Targets
0.66Moderate
epilepsyOpen Targets
0.61Moderate
major depressive disorderOpen Targets
0.61Moderate
insomniaOpen Targets
0.61Moderate
migraine disorderOpen Targets
0.61Moderate
panic disorderOpen Targets
0.60Moderate
anxiety disorderOpen Targets
0.60Moderate
AgitationOpen Targets
0.60Moderate
AnxietyOpen Targets
0.60Moderate
postpartum depressionOpen Targets
0.58Moderate
PainOpen Targets
0.57Moderate
status epilepticusOpen Targets
0.57Moderate
generalized anxiety disorderOpen Targets
0.56Moderate
HeadacheOpen Targets
0.55Moderate
Lennox-Gastaut syndromeOpen Targets
0.55Moderate
depressive disorderOpen Targets
0.53Moderate
Stiff-Person syndromeOpen Targets
0.53Moderate
partial epilepsyOpen Targets
0.51Moderate
Developmental and epileptic encephalopathy 78UniProt
Pathogenic Variants20
NM_000807.4(GABRA2):c.881C>T (p.Thr294Ile)Pathogenic
not provided|Developmental and epileptic encephalopathy, 78
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 294
NM_000807.4(GABRA2):c.839C>T (p.Pro280Leu)Pathogenic
not provided|Inborn genetic diseases
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 280
NM_000807.4(GABRA2):c.995C>T (p.Ala332Val)Pathogenic
Alcohol dependence|Developmental and epileptic encephalopathy, 78
โ˜…โ˜…โ˜†โ˜†2023โ†’ Residue 332
NM_000807.4(GABRA2):c.281G>A (p.Arg94Gln)Likely pathogenic
not provided
โ˜…โ˜†โ˜†โ˜†2026โ†’ Residue 94
NM_000807.4(GABRA2):c.895A>C (p.Ser299Arg)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†2025โ†’ Residue 299
NM_000807.4(GABRA2):c.850G>T (p.Val284Leu)Likely pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†2024โ†’ Residue 284
NM_000807.4(GABRA2):c.850G>A (p.Val284Met)Likely pathogenic
not provided
โ˜…โ˜†โ˜†โ˜†2023โ†’ Residue 284
NM_000807.4(GABRA2):c.124T>A (p.Phe42Ile)Likely pathogenic
not provided
โ˜…โ˜†โ˜†โ˜†2023โ†’ Residue 42
NM_000807.4(GABRA2):c.875C>A (p.Thr292Lys)Likely pathogenic
Developmental and epileptic encephalopathy, 78|not provided
โ˜…โ˜†โ˜†โ˜†2022โ†’ Residue 292
NM_000807.4(GABRA2):c.883A>T (p.Thr295Ser)Likely pathogenic
GABRA2-related disorder
โ˜…โ˜†โ˜†โ˜†2022โ†’ Residue 295
NM_000807.4(GABRA2):c.197C>T (p.Thr66Ile)Likely pathogenic
not provided
โ˜…โ˜†โ˜†โ˜†2022โ†’ Residue 66
NM_000807.4(GABRA2):c.851T>G (p.Val284Gly)Likely pathogenic
Intellectual disability
โ˜…โ˜†โ˜†โ˜†2020โ†’ Residue 284
NM_000807.4(GABRA2):c.875C>T (p.Thr292Ile)Likely pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†2019โ†’ Residue 292
NM_000807.4(GABRA2):c.644T>C (p.Leu215Ser)Likely pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†โ†’ Residue 215
NM_000807.4(GABRA2):c.460C>G (p.Leu154Val)Likely pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†โ†’ Residue 154
NM_000807.4(GABRA2):c.988_989insTTATG (p.Glu330fs)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜…โ˜†โ˜†โ˜†โ†’ Residue 330
NM_000807.4(GABRA2):c.975C>A (p.Phe325Leu)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜†โ˜†โ˜†โ˜†2020โ†’ Residue 325
NM_000807.4(GABRA2):c.788T>C (p.Met263Thr)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜†โ˜†โ˜†โ˜†2020โ†’ Residue 263
NM_000807.4(GABRA2):c.871C>G (p.Leu291Val)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜†โ˜†โ˜†โ˜†2020โ†’ Residue 291
NM_000807.4(GABRA2):c.855del (p.Phe285fs)Pathogenic
Developmental and epileptic encephalopathy, 78
โ˜†โ˜†โ˜†โ˜†โ†’ Residue 285
View on ClinVar โ†—
Drug Targets75
ABP-700Phase II
GABA-A receptor; anion channel agonist
ACAMPROSATEApproved
Glutamate [NMDA] receptor antagonist
alcohol dependence
ACAMPROSATE CALCIUMApproved
Glutamate [NMDA] receptor antagonist
alcohol dependence
ADIPIPLONPhase II
GABA-A receptor; anion channel partial agonist
sleep-wake disorder
ALPRAZOLAMApproved
GABA-A receptor; anion channel positive allosteric modulator
panic disorder
AZD6280Phase I
GABA receptor alpha-2 subunit positive allosteric modulator
anxiety disorder
AZD7325Phase II
GABA receptor alpha-2 subunit positive allosteric modulator
anxiety disorder
BREXANOLONEApproved
GABA-A receptor; anion channel positive allosteric modulator
BROMAZEPAMApproved
GABA receptor alpha-2 subunit positive allosteric modulator
anxiety disorder
BUTABARBITALApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
BUTALBITALApproved
GABA-A receptor; anion channel positive allosteric modulator
migraine disorder
CENOBAMATEApproved
Sodium channel alpha subunit inhibitor
Seizure
CHLORDIAZEPOXIDEApproved
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
CHLORDIAZEPOXIDE HYDROCHLORIDEApproved
GABA-A receptor; anion channel positive allosteric modulator
CIPEPOFOLPhase III
GABA-A receptor; anion channel agonist
CLOBAZAMApproved
GABA-A receptor; anion channel positive allosteric modulator
CLOMETHIAZOLEPhase III
GABA-A receptor; anion channel positive allosteric modulator
stroke
CLONAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
CLORAZEPATE DIPOTASSIUMApproved
GABA-A receptor; anion channel positive allosteric modulator
CLORAZEPIC ACIDApproved
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
CLOTIAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
DARIGABATPhase II
GABA-A receptor; anion channel agonist
Chronic pain
DESFLURANEApproved
Potassium channel subfamily K member 10 opener
DIAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
Agitation
ENFLURANEApproved
Potassium channel subfamily K member 10 opener
ESTAZOLAMApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
ESZOPICLONEApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
ETHCHLORVYNOLApproved
GABA-A receptor; anion channel positive modulator
insomnia
ETIFOXINEApproved
GABA-A receptor; anion channel antagonist
Anxiety
ETOMIDATEApproved
GABA-A receptor; anion channel positive modulator
FLUMAZENILApproved
GABA-A receptor; anion channel allosteric antagonist
FLUNITRAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
FLURAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
FLURAZEPAM HYDROCHLORIDEApproved
GABA-A receptor; anion channel positive allosteric modulator
GANAXOLONEApproved
GABA-A receptor; anion channel positive allosteric modulator
epilepsy
GLUTETHIMIDEApproved
GABA-A receptor; anion channel positive modulator
insomnia
HALAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
HALOTHANEApproved
Potassium channel subfamily K member 10 opener
ISOFLURANEApproved
Potassium channel subfamily K member 2 opener
LORAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
major depressive disorder
MEPROBAMATEApproved
GABA-A receptor; anion channel agonist
anxiety disorder
METHAQUALONEUNKNOWN
GABA-A receptor; anion channel positive allosteric modulator
insomnia
METHAQUALONE HYDROCHLORIDEUNKNOWN
GABA-A receptor; anion channel positive allosteric modulator
METHARBITALApproved
GABA-A receptor; anion channel positive allosteric modulator
epilepsy
METHOHEXITALApproved
GABA-A receptor; anion channel positive allosteric modulator
METHOXYFLURANEApproved
GABA-A receptor; anion channel positive modulator
METHYPRYLONApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
MIDAZOLAMApproved
GABA-A receptor; anion channel positive allosteric modulator
epilepsy
MIDAZOLAM HYDROCHLORIDEApproved
GABA-A receptor; anion channel positive allosteric modulator
amnesia
OXAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
Agitation
PADSEVONILPhase II/III
GABA-A receptor; anion channel partial agonist
epilepsy
PAGOCLONEPhase II/III
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
PENTOBARBITALApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
PENTOBARBITAL SODIUMUNKNOWN
GABA-A receptor; anion channel positive allosteric modulator
PRAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
anxiety disorder
PRIMIDONEApproved
GABA-A receptor; anion channel positive allosteric modulator
epilepsy
PROPOFOLApproved
GABA-A receptor; anion channel positive allosteric modulator
QUAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
REMIMAZOLAMApproved
GABA-A receptor; anion channel positive allosteric modulator
REMIMAZOLAM BESYLATEApproved
GABA-A receptor; anion channel positive allosteric modulator
RESEQUINILPhase II
GABA-A receptor; anion channel inverse agonist
epilepsy
SECOBARBITALApproved
GABA-A receptor; anion channel positive allosteric modulator
SECOBARBITAL SODIUMUNKNOWN
GABA-A receptor; anion channel positive allosteric modulator
SEVOFLURANEApproved
Glycine receptor (alpha-1/beta) positive modulator
TALBUTALApproved
GABA-A receptor; anion channel positive allosteric modulator
Irritability
TEMAZEPAMApproved
GABA-A receptor; anion channel positive allosteric modulator
insomnia
TETRAZEPAMUNKNOWN
GABA-A receptor; anion channel positive allosteric modulator
THIAMYLALApproved
GABA-A receptor; anion channel positive allosteric modulator
THIOPENTALApproved
GABA-A receptor; anion channel positive allosteric modulator
THIOPENTAL SODIUMPhase I
GABA-A receptor; anion channel positive allosteric modulator
amnesia
TOPIRAMATEApproved
Glutamate receptor ionotropic AMPA antagonist
epilepsy
TRIAZOLAMApproved
GABA-A receptor; anion channel positive allosteric modulator
TRICLOFOS SODIUMApproved
GABA-A receptor; anion channel positive modulator
insomnia
ZOPICLONEApproved
GABA-A receptor; agonist GABA site positive allosteric modulator
insomnia
ZURANOLONEApproved
GABA-A receptor; anion channel positive allosteric modulator
postpartum depression
Related Genes
GABRB3Protein interaction93%ACADMProtein interaction92%GABBR1Protein interaction89%GABBR2Protein interaction89%GABRA3Shared pathway89%GABRA1Protein interaction86%
Tissue Expression6 tissues
Brain
100%
Ovary
2%
Heart
1%
Liver
0%
Bone Marrow
0%
Lung
0%
Gene Interaction Network
Click a node to explore
GABRA2GABRB3ACADMGABBR1GABBR2GABRA3GABRA1
PROTEIN STRUCTURE
Preparing viewerโ€ฆ
PDB9CRV ยท 3.18 ร… ยท EM
View on RCSB โ†—
Constraintโ“˜
LOEUFโ“˜
0.49Moderately Constrained
pLIโ“˜
0.98Intolerant
Observed/Expected LoF0.26 [0.15โ€“0.49]
RankingsWhere GABRA2 stands among ~20K protein-coding genes
  • #3,822of 20,598
    Most Researched123 ยท top quartile
  • #20of 1,025
    FDA-Approved Drug Targets59 ยท top 5%
  • #2,187of 5,498
    Most Pathogenic Variants20
  • #2,888of 17,882
    Most Constrained (LOEUF)0.49 ยท top quartile
Genes detectedGABRA2
Sources retrieved10 papers
Response timeโ€”
๐Ÿ“„ Sources
10โ–ผ
1
Genetic variations in GABA metabolism and epilepsy.
PMID: 35850019
Seizure ยท 2022
1.00
2
Genetics of alcoholism.
PMID: 25307596
Handb Clin Neurol ยท 2014
0.90
3
Genetics of alcoholism.
PMID: 25399692
Curr Psychiatry Rep ยท 2014
0.80
4
PMID: 39637100
0.70
5
Genetics and alcoholism.
PMID: 23712313
Nat Rev Gastroenterol Hepatol ยท 2013
0.60