HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GDI2
GDP dissociation inhibitor 2
Chromosome 10 · 10p15.1
NCBI Gene: 2665Ensembl: ENSG00000057608.19HGNC: HGNC:4227UniProt: P50395
153PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingnegative regulation of cilium assemblynegative regulation of protein localization to ciliumcytosolneurodegenerative diseaseAbnormality of the skeletal systemkidney transplantprostate carcinoma
✦AI Summary

GDI2 (GDP dissociation inhibitor 2) is a negative regulator of Rab GTPases that maintains these small GTPases in their inactive GDP-bound state, thereby controlling intracellular membrane trafficking and vesicle transport 1. Mechanistically, GDI2 extracts Rab GTPases from membranes to the cytoplasm; however, itaconate can alkylate critical cysteine residues on GDI2 (positions 203, 335, and 414), impairing this extraction function and promoting Rab retention on membranes 2. GDI2 also negatively regulates ciliogenesis through inhibition of RAB8A 1. Clinically, elevated GDI2 expression is associated with poor prognosis across multiple cancers. In hepatocellular carcinoma, high GDI2 correlates with aggressive tumor features and worse survival, functioning through lipid metabolism and extracellular matrix pathways 3. In breast cancer, GDI2 cooperates with RAB5/RAB7A to regulate αVβ6-HER2 cross-talk and invasion, with dysregulated GDI2 recruitment contributing to trastuzumab resistance 4. In prostate cancer, paclitaxel inhibits GDI2 expression to suppress proliferation via p75NTR pathway activation 5. Conversely, GDI2 deletion ameliorates Alzheimer's disease pathology by altering amyloid precursor protein trafficking and reducing amyloid-β production 6. Small-molecule GDI2 inhibitors show promise for inducing paraptosis in pancreatic cancer 7.

Sources cited
1
GDI2 prevents GDP-GTP exchange of Rab proteins, regulating membrane trafficking and negatively regulating ciliogenesis through RAB8A inhibition
PMID: 25860027
2
Itaconate alkylates GDI2 at cysteines 203, 335, and 414, impairing Rab GTPase extraction and facilitating viral infection
PMID: 39730330
3
High GDI2 expression in hepatocellular carcinoma correlates with aggressive features, poor survival, and lipid metabolism/ECM pathway involvement
PMID: 34894398
4
GDI2 cooperates with RAB5/RAB7A in αVβ6-HER2 cross-talk to promote breast cancer invasion; dysregulated in trastuzumab-resistant cells
PMID: 39630893
5
Paclitaxel targets GDI2 in prostate cancer, suppressing proliferation and promoting apoptosis via p75NTR pathway activation
PMID: 34051575
6
GDI2 deletion reduces amyloid-β production and ameliorates cognitive impairment by altering APP intracellular transport in Alzheimer's disease models
PMID: 38382624
7
GDI2 inhibitors disrupt GDI2-Rab1A interaction and induce paraptosis in pancreatic cancer through ER stress and vacuolization
PMID: 37885576
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.37Weak
Abnormality of the skeletal systemOpen Targets
0.32Weak
kidney transplantOpen Targets
0.26Weak
prostate carcinomaOpen Targets
0.24Weak
ovarian neoplasmOpen Targets
0.19Weak
breast carcinomaOpen Targets
0.14Weak
cutaneous melanomaOpen Targets
0.13Weak
drug allergyOpen Targets
0.11Weak
colorectal carcinomaOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.07Suggestive
retinitis pigmentosaOpen Targets
0.07Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.07Suggestive
early-onset non-syndromic cataractOpen Targets
0.05Suggestive
X-linked retinal dysplasiaOpen Targets
0.05Suggestive
snowflake vitreoretinal degenerationOpen Targets
0.05Suggestive
breast cancerOpen Targets
0.05Suggestive
severe early-childhood-onset retinal dystrophyOpen Targets
0.05Suggestive
Coats diseaseOpen Targets
0.05Suggestive
cataract 50 with or without glaucomaOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RAB5CProtein interaction99%RAB8BProtein interaction99%RAB11BProtein interaction98%RAB5AProtein interaction97%RAB10Protein interaction96%RAB8AProtein interaction94%
Tissue Expression6 tissues
Brain
100%
Liver
52%
Lung
43%
Bone Marrow
38%
Heart
38%
Ovary
36%
Gene Interaction Network
Click a node to explore
GDI2RAB5CRAB8BRAB11BRAB5ARAB10RAB8A
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P50395
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.77LoF Tolerant
pLIⓘ
0.48Tolerant
Observed/Expected LoF0.37 [0.19–0.77]
RankingsWhere GDI2 stands among ~20K protein-coding genes
  • #2,953of 20,598
    Most Researched153 · top quartile
  • #6,287of 17,882
    Most Constrained (LOEUF)0.77
Genes detectedGDI2
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Itaconate facilitates viral infection via alkylating GDI2 and retaining Rab GTPase on the membrane.
PMID: 39730330
Signal Transduct Target Ther · 2024
1.00
2
Proteome-wide mendelian randomization study implicates therapeutic targets in common cancers.
PMID: 37735436
J Transl Med · 2023
0.90
3
A trafficking regulatory subnetwork governs α
PMID: 39630893
Sci Adv · 2024
0.80
4
PMID: 34894398
Aging (Albany NY) · 2021
0.70
5
The role of the Siglec-G ITIM domain during bacterial infection.
PMID: 35809291
Cell Mol Biol (Noisy-le-grand) · 2022
0.68