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27 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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GLA
galactosidase alpha
Chromosome X · Xq22.1
NCBI Gene: 2717Ensembl: ENSG00000102393.15HGNC: HGNC:4296UniProt: A0A3B3IUC4
300PubMed Papers
21Diseases
2Drugs
1,117Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
glycosphingolipid catabolic processsignaling receptor bindingcytoplasmextracellular regionFabry diseasecardiomyopathyAngiokeratoma corporis diffusumAbnormality of the cardiovascular system
✦AI Summary

GLA encodes α-galactosidase A, a lysosomal hydrolase that catalyzes the degradation of glycosphingolipids, particularly glycosylceramide and globotriaosylceramide (Gb3) 1. The enzyme functions as a homodimer in the lysosomal lumen, where it participates in glycoside catabolism and oligosaccharide metabolism 2. Mutations in the GLA gene cause Fabry disease, an X-linked lysosomal storage disorder characterized by systemic pathology 1. Loss of α-Gal A activity results in pathological Gb3 accumulation in multiple organs 3. Affected males (hemizygous) typically manifest classical disease, while heterozygous females exhibit variable phenotypes depending on X-chromosome X patterns and allele-specific DNA methylation at the GLA promoter 45. Fabry disease presents with multi-organ dysfunction including ischemic stroke, peripheral neuropathy, cardiac dysfunction, and chrX kidney disease 1. Pathogenic GLA variants consistently associate with disease features, while variants of uncertain significance may acquire Fabry phenotypes only in patients with elevated cardiovascular risk burden 5. Clinical interventions include enzyme replacement therapy, chaperone therapy (migalastat), which improves enzyme activity particularly in missense mutations with minor protein conformational changes 2, and emerging AAV9-mediated gene therapy, which demonstrates superior biodistribution and efficacy compared to AAV8 vectors 3.

Sources cited
1
GLA mutations cause Fabry disease with systemic vasculopathy and multi-organ complications including stroke, neuropathy, cardiac and renal dysfunction
PMID: 26564084
2
Novel GLA missense mutations show variable pathogenicity; migalastat improves enzyme activity particularly in mutations with minor protein conformational changes
PMID: 40120803
3
Pathogenic GLA variants associate with Fabry disease features; variants of uncertain significance manifest disease phenotype only in high cardiovascular risk patients
PMID: 41111061
4
Phenotypic heterogeneity in heterozygous females with Fabry disease relates to X-chromosome inactivation patterns and allele-specific DNA methylation at GLA promoter
PMID: 33531072
5
GLA mutations cause α-galactosidase A deficiency and globotriaosylceramide accumulation; AAV9-mediated gene therapy demonstrates superior biodistribution and therapeutic efficacy
PMID: 40725422
Disease Associationsⓘ21
Fabry diseaseOpen Targets
0.89Strong
cardiomyopathyOpen Targets
0.60Moderate
Angiokeratoma corporis diffusumOpen Targets
0.58Moderate
Abnormality of the cardiovascular systemOpen Targets
0.56Moderate
hypertrophic cardiomyopathyOpen Targets
0.53Moderate
Renal insufficiencyOpen Targets
0.46Moderate
familial hypertrophic cardiomyopathyOpen Targets
0.45Moderate
strokeOpen Targets
0.37Weak
Ischemic strokeOpen Targets
0.37Weak
kidney failureOpen Targets
0.37Weak
Renal cystOpen Targets
0.37Weak
cerebral small vessel diseaseOpen Targets
0.37Weak
hemorrhagic strokeOpen Targets
0.37Weak
neuroinflammatory disorderOpen Targets
0.34Weak
hereditary coproporphyriaOpen Targets
0.30Weak
nephrotic syndromeOpen Targets
0.26Weak
Rare familial disorder with hypertrophic cardiomyopathyOpen Targets
0.17Weak
hypertrophic cardiomyopathy 1Open Targets
0.16Weak
Charcot-Marie-Tooth diseaseOpen Targets
0.12Weak
steroid-resistant nephrotic syndromeOpen Targets
0.12Weak
Fabry diseaseUniProt
Pathogenic Variants1,117
NM_000169.3(GLA):c.639+1G>APathogenic
Fabry disease
★★☆☆2026
NM_000169.3(GLA):c.169C>T (p.Gln57Ter)Pathogenic
Fabry disease|not provided
★★☆☆2026→ Residue 57
NM_000169.3(GLA):c.1066C>T (p.Arg356Trp)Pathogenic
Fabry disease|not provided|GLA-related disorder
★★☆☆2026→ Residue 356
NM_000169.3(GLA):c.644A>G (p.Asn215Ser)Pathogenic
Fabry disease|not provided|Cardiovascular phenotype|Fabry disease;Hypertrophic cardiomyopathy|Cardiomyopathy
★★☆☆2026→ Residue 215
NM_000169.3(GLA):c.1087C>T (p.Arg363Cys)Pathogenic
not provided|Fabry disease|Cardiovascular phenotype
★★☆☆2026→ Residue 363
NM_000169.3(GLA):c.439G>A (p.Gly147Arg)Pathogenic
Fabry disease|Cardiovascular phenotype
★★☆☆2026→ Residue 147
NM_000169.3(GLA):c.274G>C (p.Asp92His)Pathogenic
Fabry disease
★★☆☆2026→ Residue 92
NM_000169.3(GLA):c.334C>T (p.Arg112Cys)Pathogenic
not provided|Fabry disease|Cardiovascular phenotype
★★☆☆2026→ Residue 112
NM_000169.3(GLA):c.966C>A (p.Asp322Glu)Pathogenic
not provided|Fabry disease
★★☆☆2026→ Residue 322
NM_000169.3(GLA):c.627G>A (p.Trp209Ter)Pathogenic
Fabry disease
★★☆☆2026→ Residue 209
NM_000169.3(GLA):c.647A>G (p.Tyr216Cys)Pathogenic
not provided|Fabry disease
★★☆☆2026→ Residue 216
NM_000169.3(GLA):c.902G>A (p.Arg301Gln)Pathogenic
Fabry disease, cardiac variant|Fabry disease|Cardiovascular phenotype|not provided|Primary familial hypertrophic cardiomyopathy
★★☆☆2026→ Residue 301
NM_000169.3(GLA):c.1088G>A (p.Arg363His)Pathogenic
Fabry disease|not provided|Cardiovascular phenotype
★★☆☆2026→ Residue 363
NM_000169.3(GLA):c.370-2A>CPathogenic
Fabry disease
★★☆☆2026
NM_000169.3(GLA):c.124A>C (p.Met42Leu)Pathogenic
not provided|Fabry disease|Cardiovascular phenotype
★★☆☆2026→ Residue 42
NM_000169.3(GLA):c.673C>G (p.His225Asp)Likely pathogenic
Fabry disease
★★☆☆2026→ Residue 225
NM_000169.3(GLA):c.640-801G>APathogenic
Fabry disease, cardiac variant|Fabry disease|not provided|Cardiomyopathy|Fabry disease;Hypertrophic cardiomyopathy|Cardiovascular phenotype|GLA-related disorder
★★☆☆2026
NM_000169.3(GLA):c.902G>C (p.Arg301Pro)Pathogenic
Fabry disease
★★☆☆2026→ Residue 301
NM_000169.3(GLA):c.1081G>A (p.Gly361Arg)Pathogenic
not provided|Fabry disease
★★☆☆2025→ Residue 361
NM_000169.3(GLA):c.950_954dup (p.Ile319fs)Pathogenic
Fabry disease|not provided
★★☆☆2025→ Residue 319
View on ClinVar ↗
Drug Targets2
MIGALASTATApproved
Alpha-galactosidase A stabiliser
Fabry disease
MIGALASTAT HYDROCHLORIDEApproved
Alpha-galactosidase A stabiliser
Fabry disease
Related Genes
ARSAProtein interaction97%ASAH1Protein interaction97%MGAMProtein interaction97%SIProtein interaction97%A4GALTProtein interaction95%UGT8Protein interaction95%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
55%
Brain
26%
Ovary
23%
Liver
23%
Heart
20%
Gene Interaction Network
Click a node to explore
GLAARSAASAH1MGAMSIA4GALTUGT8
PROTEIN STRUCTURE
Preparing viewer…
PDB3HG3 · 1.90 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.32Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.14 [0.07–0.32]
RankingsWhere GLA stands among ~20K protein-coding genes
  • #1,165of 20,598
    Most Researched300 · top 10%
  • #535of 1,025
    FDA-Approved Drug Targets2
  • #26of 5,498
    Most Pathogenic Variants1,117 · top 1%
  • #1,327of 17,882
    Most Constrained (LOEUF)0.32 · top 10%
Genes detectedGLA
Sources retrieved27 papers
Response time—
📄 Sources
27▼
1
Fabry disease.
PMID: 26564084
Handb Clin Neurol · 2015
1.00
2
The Gut-Lung Axis in Health and Respiratory Diseases: A Place for Inter-Organ and Inter-Kingdom Crosstalks.
PMID: 32140452
Front Cell Infect Microbiol · 2020
0.90
3
Pathogenicity of novel GLA gene missense mutations in Fabry disease and the therapeutic impact of migalastat.
PMID: 40120803
J Adv Res · 2026
0.80
4
Clinical and Biochemical Characterization of Fabry Disease Associated GLA Gene Variants: Data From a Large Cohort of 469 Thousand Genotyped Subjects of the UK Biobank Database.
PMID: 41111061
J Inherit Metab Dis · 2025
0.70
5
Generation of a gene-corrected human isogenic iPSC line from a patient with Fabry disease carrying the GLA variant c.1069C>T using CRISPR/Cas9-mediated homology directed repair.
PMID: 40222082
Stem Cell Res · 2025
0.68