HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GYPB
glycophorin B (MNS blood group)
Chromosome 4 · 4q31.21
NCBI Gene: 2994Ensembl: ENSG00000250361.10HGNC: HGNC:4703UniProt: P06028
73PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingankyrin-1 complexplasma membranemembranechronic obstructive pulmonary diseasemalariathyroid cancerAbnormality of the skeletal system
✦AI Summary

GYPB encodes glycophorin B, a transmembrane protein that serves as a component of the ankyrin-1 complex involved in erythrocyte membrane stability and shape. The protein carries the S/s antigens and the 'universal' U antigen of the MNS blood group system 1. GYPB is located in a highly homologous gene cluster with GYPA and GYPE, making it susceptible to gene conversion events and hybrid gene formation that can abolish antigen expression 2. The U- phenotype, found in approximately 1% of individuals of African ancestry, results from complete GYPB deletions rather than the previously assumed GYPB*01N deletion 1. GYPB shows significant genetic diversity through hybrid formations with GYPA, creating variants like GP.Mur that express low-incidence antigens such as Mia, particularly common in Southeast Asian populations 3. The protein functions as a receptor for Plasmodium falciparum invasion, with the GYPB*S allele associated with increased susceptibility to malaria infection in Brazilian populations 4. These genetic variations present challenges for blood typing and transfusion compatibility, as current genotyping methods may not accurately predict phenotypes due to complex hybrid gene structures 5. The extensive polymorphism in GYPB reflects evolutionary pressure from infectious diseases, particularly malaria 6.

Sources cited
1
GYPB encodes glycophorin B carrying S/s and U antigens, with U- phenotype in 1% of African ancestry individuals due to complete GYPB deletions
PMID: 32473076
2
Gene conversion events between GYPB and GYPE can abolish S and s antigen expression
PMID: 25740598
3
GYPB shows genetic diversity through hybrid formations creating variants like GP.Mur expressing Mia antigens in Southeast Asian populations
PMID: 34117642
4
GYPB functions as a P. falciparum receptor with GYPB*S allele associated with increased malaria susceptibility
PMID: 21283638
5
Hybrid gene structures create challenges for accurate blood group genotyping
PMID: 26247620
6
GYPB polymorphism reflects evolutionary pressure from infectious diseases, particularly malaria
PMID: 36224278
Disease Associationsⓘ20
chronic obstructive pulmonary diseaseOpen Targets
0.38Weak
malariaOpen Targets
0.38Weak
thyroid cancerOpen Targets
0.32Weak
Abnormality of the skeletal systemOpen Targets
0.28Weak
nephrotic syndromeOpen Targets
0.15Weak
Blackfan-Diamond anemiaOpen Targets
0.10Suggestive
infectionOpen Targets
0.08Suggestive
goutOpen Targets
0.08Suggestive
alpha thalassemia-intellectual disability syndrome type 1Open Targets
0.07Suggestive
Alpha-thalassemia - intellectual disability syndrome linked to chromosome 16Open Targets
0.07Suggestive
inosine triphosphatase deficiencyOpen Targets
0.07Suggestive
hemolytic anemia due to adenylate kinase deficiencyOpen Targets
0.06Suggestive
Heinz body anemiaOpen Targets
0.06Suggestive
Hereditary persistence of fetal hemoglobin - beta-thalassemiaOpen Targets
0.06Suggestive
hereditary persistence of fetal hemoglobin-sickle cell disease syndromeOpen Targets
0.06Suggestive
delta-beta-thalassemiaOpen Targets
0.06Suggestive
autosomal dominant sideroblastic anemiaOpen Targets
0.06Suggestive
Constitutional sideroblastic anemiaOpen Targets
0.06Suggestive
Pyruvate kinase hyperactivityOpen Targets
0.05Suggestive
primary familial polycythemia due to EPO receptor mutationOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ALAS2Protein interaction100%ANK1Protein interaction100%CA1Protein interaction100%SLC4A1Protein interaction100%CD47Protein interaction99%ACKR1Protein interaction96%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
1%
Brain
0%
Liver
0%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
GYPBALAS2ANK1CA1SLC4A1CD47ACKR1
PROTEIN STRUCTURE
Preparing viewer…
PDB8CS9 · 2.74 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.69LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.94 [0.53–1.69]
RankingsWhere GYPB stands among ~20K protein-coding genes
  • #6,468of 20,598
    Most Researched73
  • #16,067of 17,882
    Most Constrained (LOEUF)1.69
Genes detectedGYPB
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A novel GYPB-A-B hybrid gene responsible for Ss and MN typing discrepancies.
PMID: 26247620
Transfusion · 2015
1.00
2
Gene conversion events between GYPB and GYPE abolish expression of the S and s blood group antigens.
PMID: 25740598
Vox Sang · 2015
0.90
3
Genetic variation of glycophorins and infectious disease.
PMID: 36224278
Immunogenetics · 2023
0.80
4
Multiple GYPB gene deletions associated with the U- phenotype in those of African ancestry.
PMID: 32473076
Transfusion · 2020
0.70
5
Joint efficacy of the three biomarkers SNCA, GYPB and HBG1 for atrial fibrillation and stroke: Analysis via the support vector machine neural network.
PMID: 35138035
J Cell Mol Med · 2022
0.60