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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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HBP1
HMG-box transcription factor 1
Chromosome 7 · 7q22.3
NCBI Gene: 26959Ensembl: ENSG00000105856.15HGNC: HGNC:23200UniProt: B4DJ36
70PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nuclear speckprotein bindingRNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription factor activity, RNA polymerase II-specifictype 1 diabetes mellitusGenu valgumGenu varumatrial fibrillation
✦AI Summary

HBP1 (HMG-box transcription factor 1) is a transcriptional repressor that functions as a potent cell cycle inhibitor through direct DNA binding to the sequence 5'-TTCATTCATTCA-3' 1. HBP1 regulates cell cycle progression by activating or repressing cell cycle genes including CDKN2A, CDKN1A, and CCND1, while antagonizing oncogenic transcription factors like TCF4, LEF1, and MYC in the Wnt/β-catenin pathway 1. The protein interacts with retinoblastoma protein (RB) to enhance histone H1.0 promoter activity, linking cell cycle control to chr7 remodeling during cell differentiation 2. Beyond cell cycle control, HBP1 exhibits tissue-specific functions. In endometrial stromal cells, HBP1 directly activates IGFBP1 expression and enhances progesterone receptor transcriptional activity, promoting decidualization essential for embryo implantation 3. In the pancreas, HBP1 upregulation protects against acute pancreatitis-induced inflammatory injury by maintaining acinar homeostasis 4. HBP1 demonstrates tumor suppressor characteristics, with reduced expression in several cancer types 1. However, in pancreatic cancer with concurrent KRAS mutations, HBP1 paradoxically facilitates progression of pancreatic intraepithelial neoplasia (PanIN) lesions 4. Multiple mechanisms suppress HBP1 in cancer cells, including microRNA regulation (miR-155, miR-17-92, miR-29a) and PI3K/AKT pathway-mediated inhibition of both transcription and direct phosphorylation 1.

Sources cited
1
HBP1 is a potent cell cycle inhibitor that activates or represses cell cycle genes (CDKN2A, CDKN1A, CCND1) and antagonizes LEF1, TCF4, and MYC in the Wnt pathway; demonstrates tumor suppressor function with reduced expression in tumors; microRNAs and PI3K/AKT pathway inhibit HBP1
PMID: 30683982
2
HBP1 interacts with retinoblastoma protein (RB) to activate histone H1(0) gene expression; HBP1 is expressed in a differentiation-dependent manner and mediates links between cell cycle control machinery and cell differentiation signals
PMID: 10958660
3
HBP1 enhances progesterone receptor activity and directly regulates IGFBP1 expression through ChIP-Seq confirmed binding; HBP1 is essential for endometrial decidualization and embryo implantation; downregulated in recurrent implantation failure
PMID: 41547916
4
HBP1 upregulation protects against pancreatic injury in acute pancreatitis by maintaining acinar homeostasis and autophagic flux; however, HBP1 facilitates PanIN progression in presence of oncogenic KRAS, promoting pancreatic neoplasia
PMID: 40404099
5
HBP1 is a transcriptional repressor involved in G1 regulation and tumor suppression; participates in a regulatory network with p38 MAP kinase pathway
PMID: 15225871
6
Human HBP1 is a high mobility group protein containing a DNA-binding domain; expressed at higher levels in myeloid and B lymphoid cell lines; enhances MPO promoter activity in transient transfection experiments
PMID: 11368363
Disease Associationsⓘ20
type 1 diabetes mellitusOpen Targets
0.36Weak
Genu valgumOpen Targets
0.32Weak
Genu varumOpen Targets
0.31Weak
atrial fibrillationOpen Targets
0.18Weak
COG5-congenital disorder of glycosylationOpen Targets
0.18Weak
insomniaOpen Targets
0.18Weak
osteoarthritis, kneeOpen Targets
0.18Weak
dyslexiaOpen Targets
0.16Weak
congenital disorder of glycosylationOpen Targets
0.12Weak
coronary artery diseaseOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Suggestive
non-small cell lung carcinomaOpen Targets
0.09Suggestive
response to statinOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
pancreatitisOpen Targets
0.08Suggestive
nasopharyngeal carcinomaOpen Targets
0.08Suggestive
type 2 diabetes mellitusOpen Targets
0.08Suggestive
prostate cancerOpen Targets
0.07Suggestive
cancerOpen Targets
0.07Suggestive
atrial flutterOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CDK8Shared pathway100%PRCCShared pathway100%CDK20Shared pathway100%CDKL4Shared pathway100%MRFAP1L2Shared pathway100%CABLES2Shared pathway100%
Tissue Expression6 tissues
Bone Marrow
100%
Heart
97%
Ovary
73%
Lung
66%
Brain
62%
Liver
37%
Gene Interaction Network
Click a node to explore
HBP1CDK8PRCCCDK20CDKL4MRFAP1L2CABLES2
PROTEIN STRUCTURE
Preparing viewer…
PDB3QVE · 2.04 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.68LoF Tolerant
pLIⓘ
0.79Intermediate
Observed/Expected LoF0.26 [0.12–0.68]
RankingsWhere HBP1 stands among ~20K protein-coding genes
  • #6,723of 20,598
    Most Researched70
  • #5,044of 17,882
    Most Constrained (LOEUF)0.68
Genes detectedHBP1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
HMGB1 upregulates NF-kB by inhibiting IKB-α and associates with diabetic retinopathy.
PMID: 31816325
Life Sci · 2020
1.00
2
AAV-mediated hepatic LPL expression ameliorates severe hypertriglyceridemia and acute pancreatitis in Gpihbp1 deficient mice and rats.
PMID: 37974401
Mol Ther · 2024
0.90
3
The HMG box transcription factor HBP1: a cell cycle inhibitor at the crossroads of cancer signaling pathways.
PMID: 30683982
Cell Mol Life Sci · 2019
0.80
4
The HBP1 transcriptional repressor and the p38 MAP kinase: unlikely partners in G1 regulation and tumor suppression.
PMID: 15225871
Gene · 2004
0.70
5
Cloning and expression of human HBP1, a high mobility group protein that enhances myeloperoxidase (MPO) promoter activity.
PMID: 11368363
Leukemia · 2001
0.60