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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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HLA-DMA
major histocompatibility complex, class II, DM alpha
Chromosome 6 · 6p21.32
NCBI Gene: 3108Ensembl: ENSG00000204257.16HGNC: HGNC:4934UniProt: P28067
119PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
peptide antigen assembly with MHC class II protein complexlysosomal membranelate endosome membranecell surface
✦AI Summary

HLA-DMA is a major histocompatibility complex class II molecule that plays a critical role in antigen presentation by catalyzing the release of the class II-associated invariant chain peptide (CLIP) from newly synthesized MHC class II molecules, thereby freeing the peptide-binding site for acquisition of antigenic peptides 1. This peptide-loading function occurs in endosomal compartments and is modulated by HLA-DO, particularly in B cells 2. HLA-DMA expression is regulated through conserved S-X-Y regulatory regions requiring class II-specific transcription factors RFX and CIITA 3. Clinically, HLA-DMA has emerged as a significant biomarker in cancer immunotherapy. In lung adenocarcinoma, decreased HLA-DMA expression correlates with poor prognosis and reduced immune infiltration, with higher expression associated with improved survival and enhanced immunotherapy response 4. In ER-negative breast cancer, HLA-DMA expression, when combined with HLA-DRA and Notch genes, synergistically predicts immune checkpoint blockade efficacy and recurrence risk through effects on T cell infiltration 5. Additionally, HLA-DMA is among key genes identified in machine learning models for sepsis identification 6. However, HLA-DMA polymorphisms do not appear to influence rheumatoid arthritis or sarcoidosis susceptibility independently 78.

Sources cited
1
HLA-DM regulates peptide loading of class II MHC molecules in endosomal compartments and is modulated by HLA-DO
PMID: 24463216
2
HLA-DM facilitates dissociation of the invariant chain peptide (CLIP) for exchange with exogenous antigens in the MHC-II compartment; HLA-DO modulates this process particularly in B cells
PMID: 30683973
3
HLA-DMA expression is regulated through conserved S-X-Y regulatory regions and requires class II-specific transcription factors RFX and CIITA
PMID: 9144496
4
Decreased HLA-DMA expression in lung adenocarcinoma is associated with poor prognosis; higher expression correlates with improved survival and enhanced immunotherapy response
PMID: 37972401
5
HLA-DMA expression synergistically predicts immune checkpoint blockade efficacy and recurrence risk in ER-negative breast cancer through effects on T cell infiltration
PMID: 35543859
6
HLA-DMA is identified as a key gene in machine learning models for sepsis identification
PMID: 40583108
7
HLA-DMA polymorphisms do not independently influence susceptibility to rheumatoid arthritis
PMID: 10321961
8
HLA-DMA gene polymorphisms do not appear to be associated with sarcoidosis susceptibility
PMID: 9349405
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HLA-DRB4Shared pathway100%HLA-DQA1Protein interaction100%HLA-DQA2Protein interaction100%HLA-DRB1Protein interaction100%CD74Protein interaction99%CTSSProtein interaction99%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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HLA-DMAHLA-DRB4HLA-DQA1HLA-DQA2HLA-DRB1CD74CTSS
PROTEIN STRUCTURE
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PDB2BC4 · 2.27 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.97LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.66 [0.46–0.97]
RankingsWhere HLA-DMA stands among ~20K protein-coding genes
  • #3,963of 20,598
    Most Researched119 · top quartile
  • #9,149of 17,882
    Most Constrained (LOEUF)0.97
Genes detectedHLA-DMA
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Prognostic gene HLA-DMA associated with cell cycle and immune infiltrates in LUAD.
PMID: 37972401
Clin Respir J · 2023
1.00
2
Expression of NOTCH1, NOTCH4, HLA-DMA and HLA-DRA is synergistically associated with T cell exclusion, immune checkpoint blockade efficacy and recurrence risk in ER-negative breast cancer.
PMID: 35543859
Cell Oncol (Dordr) · 2022
0.90
3
HLA DRB1, DMA, and DMB gene polymorphisms in rheumatoid arthritis.
PMID: 10321961
Hum Immunol · 1999
0.80
4
HLA-DM and HLA-DO, key regulators of MHC-II processing and presentation.
PMID: 24463216
Curr Opin Immunol · 2014
0.70
5
Genetic influences on sarcoidosis.
PMID: 9349405
Eye (Lond) · 1997
0.60