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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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IFNE
interferon epsilon
Chromosome 9 · 9p21.3
NCBI Gene: 338376Ensembl: ENSG00000184995.7HGNC: HGNC:18163UniProt: Q86WN2
28PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytokine activitydefense response to bacteriumresponse to exogenous dsRNAdefense response to virushypothyroidismthyroid diseaseliver diseasecrush injury
✦AI Summary

IFNE (interferon epsilon) is a constitutively expressed type I interferon uniquely localized to reproductive tract epithelia, where it maintains basal expression of interferon-stimulated genes and provides immunosurveillance against infections 1. Unlike canonical type I interferons (α/β), IFNE is not pathogen-induced but rather hormonally regulated during the estrous cycle and pregnancy 23. IFNE signals through IFNAR1/2 and JAK-STAT pathways with lower potency than IFNα/β in vitro, yet demonstrates robust in vivo efficacy 1. Mechanistically, IFNE protects the female reproductive tract from sexually transmitted viruses including Zika virus through constitutive expression that resists viral antagonism 4. IFNE also functions as an intrinsic tumor suppressor in high-grade serous ovarian cancer by directly inhibiting tumor cells and activating anti-tumor immunity while preventing myeloid-derived suppressor cell accumulation 5. Beyond the female tract, IFNE is expressed in testicular spermatogenic cells and macrophages, protecting against viral infection and inflammation 6. Recently, IFNE loss in Barrett's esophagus reduced immune infiltration, implicating broader roles in mucosal immune surveillance 7. IFNE is highly upregulated in alveolar macrophages responding to Mycobacterium tuberculosis 8. These findings establish IFNE as a specialized immunoregulator maintaining tissue-specific antiviral and anti-tumor defenses.

Sources cited
1
IFNE is constitutively expressed by reproductive tract epithelium, hormonally regulated, binds IFNAR1/2, signals via JAK-STAT pathway, has lower potency than IFNα/β in vitro but demonstrates in vivo efficacy
PMID: 31734130
2
IFNE is constitutively expressed in equine endometrium in luminal and glandular epithelial cells, upregulated during luteal phase and pregnancy, not induced by pathogens
PMID: 29807828
3
IFNE is expressed in myometrium, cervix, and chorioamniotic membranes during pregnancy; amniotic fluid IFNE levels increased in preterm labor with intra-amniotic infection
PMID: 35898609
4
Constitutive IFNE expression protects female reproductive tract from Zika virus; IFNE-deficient mice show increased susceptibility; IFNE resists viral NS protein antagonism
PMID: 36897927
5
IFNE is constitutively expressed in fallopian tube epithelium, functions as tumor suppressor in ovarian cancer through direct tumor cell action and anti-tumor immunity activation including T cell and NK cell activation
PMID: 37587335
6
IFNE is constitutively expressed in testis by spermatogenic cells, Leydig cells and macrophages; protects against Zika virus-induced inflammation and testicular damage
PMID: 39621805
7
IFNE loss reduces immune infiltration in Barrett's esophagus and affects interferon response pathway
PMID: 39753721
8
IFNE is specifically and highly upregulated in alveolar macrophages at baseline and after Mycobacterium tuberculosis infection compared with monocyte-derived macrophages
PMID: 38836816
Disease Associationsⓘ20
hypothyroidismOpen Targets
0.25Weak
thyroid diseaseOpen Targets
0.22Weak
liver diseaseOpen Targets
0.20Weak
crush injuryOpen Targets
0.20Weak
myxedemaOpen Targets
0.20Weak
HypercholesterolemiaOpen Targets
0.18Weak
nutritional deficiency diseaseOpen Targets
0.16Weak
autoimmune diseaseOpen Targets
0.15Weak
ovarian dysfunctionOpen Targets
0.15Weak
response to antihypertensive drugOpen Targets
0.14Weak
Hashimoto's thyroiditisOpen Targets
0.14Weak
placenta praeviaOpen Targets
0.14Weak
autoimmune thyroid diseaseOpen Targets
0.14Weak
infectionOpen Targets
0.10Suggestive
Zika virus infectious diseaseOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
adverse effectOpen Targets
0.07Suggestive
response to stimulusOpen Targets
0.07Suggestive
Immunodeficiency due to a late component of complements deficiencyOpen Targets
0.06Suggestive
Immunodeficiency due to interleukin-1 receptor-associated kinase-4 deficiencyOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
IFNA1Protein interaction100%IFNAR1Protein interaction100%IFNAR2Protein interaction100%IFNGR1Protein interaction100%IFNKProtein interaction100%IFNLR1Protein interaction100%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
100%
Ovary
100%
Brain
50%
Heart
0%
Liver
0%
Gene Interaction Network
Click a node to explore
IFNEIFNA1IFNAR1IFNAR2IFNGR1IFNKIFNLR1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q86WN2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.89LoF Tolerant
pLIⓘ
0.29Tolerant
Observed/Expected LoF0.00 [0.00–1.89]
RankingsWhere IFNE stands among ~20K protein-coding genes
  • #12,366of 20,598
    Most Researched28
  • #17,195of 17,882
    Most Constrained (LOEUF)1.89
Genes detectedIFNE
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Interferon-ε is a tumour suppressor and restricts ovarian cancer.
PMID: 37587335
Nature · 2023
1.00
2
Context-dependent effects of CDKN2A and other 9p21 gene losses during the evolution of esophageal cancer.
PMID: 39753721
Nat Cancer · 2025
0.90
3
Human Alveolar and Monocyte-Derived Human Macrophage Responses to Mycobacterium tuberculosis.
PMID: 38836816
J Immunol · 2024
0.80
4
Constitutive expression and distinct properties of IFN-epsilon protect the female reproductive tract from Zika virus infection.
PMID: 36897927
PLoS Pathog · 2023
0.70
5
Defining a role for Interferon Epsilon in normal and complicated pregnancies.
PMID: 35898609
Heliyon · 2022
0.60