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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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IP6K3
inositol hexakisphosphate kinase 3
Chromosome 6 · 6p21.31
NCBI Gene: 117283Ensembl: ENSG00000161896.13HGNC: HGNC:17269UniProt: A8K1M0
17PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Kinase
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
inositol phosphate biosynthetic processprotein phosphorylationinositol hexakisphosphate 6-kinase activityphosphatidylinositol metabolic processasthmaplacental retentionulcerative colitishyperthyroidism
✦AI Summary

IP6K3 (inositol hexakisphosphate kinase 3) is an enzyme that converts inositol hexakisphosphate (IP6) to inositol pyrophosphates, specifically 5-diphosphoinositol pentakisphosphate (IP7), which function as high-energy signaling molecules 1. The enzyme is highly expressed in skeletal muscle and myotubes, with expression elevated under metabolic stress conditions including diabetes, fasting, and muscle disuse 1. Mechanistically, IP6K3 operates through both enzymatic activity in synthesizing inositol pyrophosphates and non-enzymatic protein-protein interactions, including association with dynein intermediate chain 2 (DIC2) at the leading edge of migrating cells to promote focal adhesion turnover 2. IP6K3 plays critical roles in metabolic regulation, as IP6K3 knockout mice display improved glucose tolerance, reduced blood glucose and insulin levels, decreased fat mass, and notably extended lifespan with reduced S6 ribosomal protein phosphorylation 1. Disease relevance includes associations with late-onset Alzheimer's disease, where specific promoter polymorphisms affect disease susceptibility, and ankylosing spondylitis in HLA-B27 positive individuals 34. Clinically, IP6K3 variants show complex relationships with both neurodegeneration risk and longevity, suggesting it functions at the crossroads of cellular survival and pathological processes 5.

Sources cited
1
IP6K3 converts IP6 to IP7, is highly expressed in muscle, regulates metabolism, and its deletion extends lifespan
PMID: 27577108
2
IP6K3 associates with DIC2 at cell leading edges to promote focal adhesion turnover
PMID: 30718399
3
IP6K3 promoter polymorphisms are associated with late-onset Alzheimer's disease susceptibility
PMID: 27345265
4
IP6K3 mutations are associated with ankylosing spondylitis in HLA-B27 positive individuals
PMID: 29778423
5
IP6K3 variants show complex relationships with both neurodegeneration and longevity
PMID: 33497757
Disease Associationsⓘ20
asthmaOpen Targets
0.47Moderate
placental retentionOpen Targets
0.34Weak
ulcerative colitisOpen Targets
0.34Weak
hyperthyroidismOpen Targets
0.33Weak
childhood onset asthmaOpen Targets
0.32Weak
sarcoidosisOpen Targets
0.32Weak
intelligenceOpen Targets
0.31Weak
coronary artery diseaseOpen Targets
0.31Weak
chronic rhinosinusitis with nasal polypsOpen Targets
0.31Weak
celiac diseaseOpen Targets
0.31Weak
JaundiceOpen Targets
0.31Weak
schizophreniaOpen Targets
0.30Weak
rheumatoid arthritisOpen Targets
0.29Weak
metabolic syndromeOpen Targets
0.27Weak
otosclerosisOpen Targets
0.27Weak
Myasthenia gravisOpen Targets
0.24Weak
neurodegenerative diseaseOpen Targets
0.23Weak
sclerosing cholangitisOpen Targets
0.21Weak
chronic hepatitis B virus infectionOpen Targets
0.20Weak
insomniaOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
IP6K2Protein interaction77%PPIP5K1Protein interaction73%PPIP5K2Protein interaction73%IPPKProtein interaction71%IP6K1Protein interaction63%ITPKBProtein interaction63%
Tissue Expression6 tissues
Heart
100%
Liver
57%
Brain
40%
Lung
30%
Ovary
1%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
IP6K3IP6K2PPIP5K1PPIP5K2IPPKIP6K1ITPKB
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q5TAQ4
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.03LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.71 [0.50–1.03]
RankingsWhere IP6K3 stands among ~20K protein-coding genes
  • #15,027of 20,598
    Most Researched17
  • #10,156of 17,882
    Most Constrained (LOEUF)1.03
Genes detectedIP6K3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Inositol Hexakisphosphate Kinase 3 Regulates Metabolism and Lifespan in Mice.
PMID: 27577108
Sci Rep · 2016
1.00
2
IP6K3 and IPMK variations in LOAD and longevity: Evidence for a multifaceted signaling network at the crossroad between neurodegeneration and survival.
PMID: 33497757
Mech Ageing Dev · 2021
0.90
3
Insights into the roles of inositol hexakisphosphate kinase 1 (IP6K1) in mammalian cellular processes.
PMID: 38403246
J Biol Chem · 2024
0.80
4
Inositol hexakisphosphate kinase 3 promotes focal adhesion turnover via interactions with dynein intermediate chain 2.
PMID: 30718399
Proc Natl Acad Sci U S A · 2019
0.70
5
Contribution of polymorphic variation of inositol hexakisphosphate kinase 3 (IP6K3) gene promoter to the susceptibility to late onset Alzheimer's disease.
PMID: 27345265
Biochim Biophys Acta · 2016
0.60