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50 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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IRF3
interferon regulatory factor 3
Chromosome 19 · 19q13.33
NCBI Gene: 3661Ensembl: ENSG00000126456.16HGNC: HGNC:6118UniProt: E2GIM5
528PubMed Papers
21Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein homodimerization activityRNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription factor activity, RNA polymerase II-specificDNA-binding transcription activator activityHerpetic encephalitissevere acute respiratory syndromeCOVID-19neurodegenerative disease
✦AI Summary

IRF3 (interferon regulatory factor 3) is a key transcriptional regulator that controls type I interferon (IFN-α/β) production during innate immune responses to viral infections 1. In unstimulated cells, IRF3 remains inactive in the cytoplasm, but upon viral infection or detection of cytosolic nucleic acids, it undergoes phosphorylation by kinases TBK1 and IKKε 23. This phosphorylation is facilitated by adaptor proteins including STING, MAVS, and TRIF, which recruit IRF3 to kinase complexes through their own phosphorylation-dependent mechanisms 1. Phosphorylated IRF3 dimerizes, translocates to the nucleus, and activates transcription of type I interferons and interferon-stimulated genes by binding to interferon-stimulated response elements (ISRE) in their promoters. Beyond its transcriptional role, phosphorylated IRF3 can promote apoptosis independently of its DNA-binding function 4. IRF3 also plays pathological roles in non-viral contexts, as bile acid-induced IRF3 phosphorylation mediates cell death and inflammation in cholestatic liver injury 5. Additionally, MTAP-deficient tumors show reduced IRF3 expression, conferring resistance to STING agonist immunotherapy 6, highlighting IRF3's clinical relevance in both antiviral immunity and cancer treatment.

Sources cited
1
IRF3 is a key regulator of type I interferon production and is recruited by phosphorylated adaptor proteins MAVS, STING, and TRIF for activation
PMID: 25636800
2
TBK1 and IKKε are essential kinases for IRF3 phosphorylation and activation
PMID: 12692549
3
STING functions as a scaffold protein to promote IRF3 phosphorylation by TBK1 in cytosolic DNA signaling
PMID: 22394562
4
Phosphorylated IRF3 can induce apoptosis independently of its DNA-binding function
PMID: 31299200
5
Bile acid-induced IRF3 phosphorylation mediates cell death and inflammation in cholestatic liver injury
PMID: 37725754
6
MTAP deficiency reduces IRF3 expression and confers resistance to STING agonist therapy
PMID: 41066563
Disease Associationsⓘ21
Herpetic encephalitisOpen Targets
0.56Moderate
severe acute respiratory syndromeOpen Targets
0.47Moderate
COVID-19Open Targets
0.47Moderate
neurodegenerative diseaseOpen Targets
0.36Weak
skin neoplasmOpen Targets
0.33Weak
schizophreniaOpen Targets
0.32Weak
basal cell carcinomaOpen Targets
0.30Weak
hypothyroidismOpen Targets
0.30Weak
autoimmune thyroid diseaseOpen Targets
0.27Weak
skin cancerOpen Targets
0.26Weak
VitiligoOpen Targets
0.21Weak
non-melanoma skin carcinomaOpen Targets
0.19Weak
CINCA syndromeOpen Targets
0.18Weak
seborrheic keratosisOpen Targets
0.17Weak
cutaneous melanomaOpen Targets
0.16Weak
genetic developmental and epileptic encephalopathyOpen Targets
0.12Weak
undetermined early-onset epileptic encephalopathyOpen Targets
0.12Weak
infectionOpen Targets
0.11Weak
viral diseaseOpen Targets
0.10Suggestive
neoplasmOpen Targets
0.10Suggestive
Encephalopathy, acute, infection-induced, 7, herpes-specificUniProt
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ATF2Protein interaction100%CREBBPProtein interaction100%IKBKBProtein interaction100%IKBKGProtein interaction100%TRIM26Protein interaction100%CALCOCO2Protein interaction100%
Tissue Expression6 tissues
Liver
100%
Ovary
98%
Lung
97%
Bone Marrow
64%
Heart
36%
Brain
29%
Gene Interaction Network
Click a node to explore
IRF3ATF2CREBBPIKBKBIKBKGTRIM26CALCOCO2
PROTEIN STRUCTURE
Preparing viewer…
PDB6SJA · 1.50 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.95LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.70 [0.53–0.95]
RankingsWhere IRF3 stands among ~20K protein-coding genes
  • #484of 20,598
    Most Researched528 · top 5%
  • #8,874of 17,882
    Most Constrained (LOEUF)0.95
Genes detectedIRF3
Sources retrieved50 papers
Response time—
📄 Sources
50▼
1
Phosphorylation of innate immune adaptor proteins MAVS, STING, and TRIF induces IRF3 activation.
PMID: 25636800
Science · 2015
1.00
2
Regulation of IRF3 activation in human antiviral signaling pathways.
PMID: 35367198
Biochem Pharmacol · 2022
0.90
3
E3 ligase RAD18 targets phosphorylated IRF3 to terminate IFNB1 transcription.
PMID: 40883572
Nat Immunol · 2025
0.84
4
Apoptotic Caspases Suppress Type I Interferon Production via the Cleavage of cGAS, MAVS, and IRF3.
PMID: 30878284
Mol Cell · 2019
0.82
5
The Cytoplasmic DNA Sensor cGAS Promotes Mitotic Cell Death.
PMID: 31299200
Cell · 2019
0.80