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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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KIR2DS4
killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 4 (gene/pseudogene)
Chromosome 19 · 19q13.42
NCBI Gene: 3809Ensembl: ENSG00000274406.1HGNC: HGNC:6336UniProt: A0A0C4ZN05
140PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
MHC class Ib protein bindingprotein bindingimmune response-inhibiting cell surface receptor signaling pathwayplasma membrane
✦AI Summary

KIR2DS4 is an activating natural killer (NK) cell receptor that recognizes HLA-C alleles and plays important roles in innate immunity and transplantation outcomes. The gene exhibits significant polymorphism, with a common deletion variant (KIR1D) that produces a truncated, soluble protein lacking transmembrane and cytoplasmic domains 1. This deletion variant occurs at high frequencies in many populations, with significant regional variation observed 2. KIR2DS4 demonstrates specific ligand recognition, showing strong preference for peptides with tryptophan at position 8 presented by HLA-C*05:01, particularly bacterial RecA epitopes from pathogens including Helicobacter, Chlamydia, and Brucella 3. The receptor's clinical significance is evident in hematopoietic stem cell transplantation, where donor KIR2DS4 variants influence acute graft-versus-host disease risk, cytomegalovirus reactivation, and overall survival 45. Additionally, KIR2DS4 combinations with specific HLA alleles affect HIV disease progression 6 and correlate with EBV antibody titers, suggesting distinct responses to different viral infections 7. The receptor's evolutionary importance is supported by inverse worldwide frequency distributions with its HLA-C*05:01 ligand, indicating balancing selection 3.

Sources cited
1
KIR2DS4 deletion variant produces truncated, soluble protein lacking transmembrane domains
PMID: 17321903
2
KIR2DS4 variants show significant regional frequency differences between populations
PMID: 28734803
3
KIR2DS4 recognizes tryptophan at position 8 peptides presented by HLA-C*05:01 and bacterial RecA epitopes
PMID: 31138701
4
Donor KIR2DS4 variants influence transplantation outcomes including GVHD and CMV reactivation
PMID: 26476204
5
KIR2DS4 variants affect survival outcomes in lymphoid disease transplantation
PMID: 37150297
6
KIR2DS4/HLA-C combinations affect HIV disease progression
PMID: 25715101
7
KIR2DS4 expression correlates with EBV antibody titers indicating viral-specific responses
PMID: 41002189
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
KIR2DL2Shared pathway100%LOC128966728Shared pathway100%KIR2DL5BShared pathway100%KIR3DL3Shared pathway100%KIR2DL5AShared pathway100%LAIR2Shared pathway100%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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KIR2DS4KIR2DL2LOC128966728KIR2DL5BKIR3DL3KIR2DL5ALAIR2
PROTEIN STRUCTURE
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PDB3H8N · 2.50 Å · X-ray
View on RCSB ↗
RankingsWhere KIR2DS4 stands among ~20K protein-coding genes
  • #3,280of 20,598
    Most Researched140 · top quartile
Genes detectedKIR2DS4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Distribution of KIR genes and KIR2DS4 gene variants in two Mexican Mestizo populations.
PMID: 28734803
Hum Immunol · 2017
1.00
2
[Establishment of sequence-based typing assay for KIR2DS4 gene and identification of a new allele KIR2DS4*016].
PMID: 35773759
Zhonghua Yi Xue Yi Chuan Xue Za Zhi · 2022
0.90
3
Studies on the expression of the deleted KIR2DS4*003 gene product and distribution of KIR2DS4 deleted and nondeleted versions in different populations.
PMID: 17321903
Hum Immunol · 2007
0.80
4
KIR2DS4 and Its Variant KIR1D Are Associated with Acute Graft-versus-Host Disease, Cytomegalovirus, and Overall Survival after Sibling-Related HLA-Matched Transplantation in Patients with Donors with KIR Gene Haplotype A.
PMID: 26476204
Biol Blood Marrow Transplant · 2016
0.70
5
The HLA-C*04: 01/KIR2DS4 gene combination and human leukocyte antigen alleles with high population frequency drive rate of HIV disease progression.
PMID: 25715101
AIDS · 2015
0.60