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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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KIR3DL1
killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 1
Chromosome 19 · 19q13.42
NCBI Gene: 3811Ensembl: ENSG00000167633.18HGNC: HGNC:6338UniProt: P43629
248PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
molecular adaptor activityamyloid-beta bindingprotein bindingnatural killer cell mediated cytotoxicity
✦AI Summary

KIR3DL1 is a polymorphic inhibitory receptor expressed on natural killer (NK) cells and T cell subsets that recognizes HLA class I allotypes expressing the Bw4 epitope 1. The receptor functions to suppress NK cell cytotoxicity through binding to HLA-A and HLA-B molecules containing the Bw4 motif (residues 77-83), though additional HLA polymorphisms outside this core epitope modulate binding affinity in a nonadditive manner 2. KIR3DL1 exhibits exceptional functional diversity: sequence variants affect both cell-surface expression frequency and intensity, while a common allelic variant (KIR3DS1) encodes an activating receptor instead 1. Evolutionary analysis reveals KIR3DL1 as an archaic allele lineage preserved in Oceanian populations, with specific polymorphisms like phenylalanine 166 enhancing HLA binding specificity 3. Clinically, KIR3DL1 polymorphisms influence disease outcomes: KIR3DL1-negative NK and CD8 T cells associate with superior HIV-1 control in Bw4-homozygous individuals 4, while therapeutic KIR3DL1 blockade (via DX9 antibody) restores NK cell cytotoxicity against interferon-gamma-induced tumor resistance in melanoma 5. The receptor exemplifies how variable NK cell receptors diversify population-level immunity through coevolution with polymorphic ligands.

Sources cited
1
KIR3DL1 is a highly polymorphic inhibitory receptor on NK cells that binds HLA-A and HLA-B with Bw4 epitope; variants affect expression frequency, intensity, and activation (KIR3DS1)
PMID: 23756244
2
HLA polymorphisms beyond the Bw4 motif influence KIR3DL1 binding affinity in a nonadditive manner; machine learning models predict binding across diverse allotypes
PMID: 40609790
3
KIR3DL1∗114 is an archaic allele lineage unique to Oceania; phenylalanine 166 forms unique contacts with HLA-peptide complexes, increasing affinity and specificity
PMID: 39476840
4
KIR3DL1-negative CD8 T cells and KIR3DL1-negative NK cells associate with better HIV-1 control in Bw4-homozygous individuals
PMID: 30147699
5
DX9 antibody blocking KIR3DL1 combined with other KIR and NKG2A antagonists restores NK cell cytotoxicity against interferon-gamma-induced tumor resistance
PMID: 38955423
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MASP1Protein interaction100%TYROBPProtein interaction100%MASP2Protein interaction99%KLRC4Protein interaction97%B2MProtein interaction96%HLA-AProtein interaction96%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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KIR3DL1MASP1TYROBPMASP2KLRC4B2MHLA-A
PROTEIN STRUCTURE
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PDB9D97 · 1.60 Å · X-ray
View on RCSB ↗
RankingsWhere KIR3DL1 stands among ~20K protein-coding genes
  • #1,557of 20,598
    Most Researched248 · top 10%
Genes detectedKIR3DL1
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
IFNγ mediates the resistance of tumor cells to distinct NK cell subsets.
PMID: 38955423
J Immunother Cancer · 2024
1.00
2
Prediction of KIR3DL1 and human leukocyte antigen binding.
PMID: 40609790
J Biol Chem · 2025
0.90
3
CD8αα homodimers function as a coreceptor for KIR3DL1.
PMID: 31420518
Proc Natl Acad Sci U S A · 2019
0.84
4
An archaic HLA class I receptor allele diversifies natural killer cell-driven immunity in First Nations peoples of Oceania.
PMID: 39476840
Cell · 2024
0.80
5
The yin-yang of KIR3DL1/S1: molecular mechanisms and cellular function.
PMID: 23756244
Crit Rev Immunol · 2013
0.70