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GeneE
26 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
KRT16
keratin 16
Chromosome 17 Β· 17q21.2
NCBI Gene: 3868Ensembl: ENSG00000186832.9HGNC: HGNC:6423UniProt: P08779
152PubMed Papers
22Diseases
0Drugs
22Pathogenic Variants
RESEARCH IMPACT
Trending
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingnucleusextracellular exosomenegative regulation of cell migrationpachyonychia congenitapachyonychia congenita 1palmoplantar keratoderma, nonepidermolytic, focal 1Non-epidermolytic palmoplantar keratoderma
✦AI Summary

KRT16 encodes keratin 16, a type I intermediate filament protein that serves as a critical regulator of skin barrier function and innate immunity. KRT16 is upregulated in response to skin injury and stress, where it acts as a barrier alarmin molecule that modulates keratinocyte proliferation, migration, and inflammatory responses 1. The protein plays a key role in regulating innate immune signaling by negatively controlling type I interferon responses through interaction with RIG-I-like receptor pathway effectors, including 14-3-3Ξ΅, thereby spatially restricting immune activation in the suprabasal epidermis 2. KRT16 expression serves as a biomarker for epidermal hyperplasia in inflammatory skin conditions including atopic dermatitis and psoriasis 34. Mutations in KRT16 cause pachyonychia congenita, an autosomal dominant disorder characterized by hypertrophic nails and palmoplantar keratoderma 56. The protein's dual role as both a structural cytoskeletal component and immune regulator positions it as a critical mediator of skin homeostasis, with dysregulation contributing to chr17 inflammatory skin diseases through altered keratinocyte behavior and excessive immune activation.

Sources cited
1
KRT16 acts as a barrier alarmin molecule upregulated upon skin injury, affecting keratinocyte proliferation, migration, and inflammatory responses
PMID: 31374826
2
KRT16 negatively regulates type I interferon signaling by interacting with RIG-I-like receptor pathway effectors including 14-3-3Ξ΅
PMID: 39763960
3
KRT16 shows characteristic upregulation in atopic dermatitis and serves as a biomarker for inflammatory skin conditions
PMID: 32344053
4
KRT16 expression is associated with epidermal hyperplasia in atopic dermatitis and is reduced by targeted therapy
PMID: 38108208
5
KRT16 mutations cause pachyonychia congenita, with the p.Leu421Pro mutation identified in Chinese patients
PMID: 30859684
6
KRT16 mutations are associated with palmoplantar keratoderma and genetic testing reveals disease-causing variants
PMID: 39630431
Disease Associationsβ“˜22
pachyonychia congenitaOpen Targets
0.74Strong
pachyonychia congenita 1Open Targets
0.67Moderate
palmoplantar keratoderma, nonepidermolytic, focal 1Open Targets
0.67Moderate
Non-epidermolytic palmoplantar keratodermaOpen Targets
0.60Moderate
genetic disorderOpen Targets
0.19Weak
Localized epidermolytic hyperkeratosisOpen Targets
0.12Weak
palmoplantar keratoderma, epidermolyticOpen Targets
0.12Weak
neoplasmOpen Targets
0.10Suggestive
oral squamous cell carcinomaOpen Targets
0.09Suggestive
psoriasisOpen Targets
0.09Suggestive
cancerOpen Targets
0.09Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
glioblastoma multiformeOpen Targets
0.07Suggestive
actinic keratosisOpen Targets
0.06Suggestive
breast cancerOpen Targets
0.05Suggestive
Autosomal dominant polycystic kidney diseaseOpen Targets
0.05Suggestive
sebaceous of Jadassohn nevusOpen Targets
0.05Suggestive
nasopharyngeal carcinomaOpen Targets
0.05Suggestive
squamous cell carcinomaOpen Targets
0.05Suggestive
Keratoderma, palmoplantar, non-epidermolytic, focal 1UniProt
Pachyonychia congenita 1UniProt
Pathogenic Variants22
NM_005557.4(KRT16):c.379C>G (p.Arg127Gly)Pathogenic
not provided|Pachyonychia congenita 1;Palmoplantar keratoderma, nonepidermolytic, focal 1
β˜…β˜…β˜†β˜†2025β†’ Residue 127
NM_005557.4(KRT16):c.379C>T (p.Arg127Cys)Pathogenic
Palmoplantar keratoderma, nonepidermolytic, focal 1|not provided|Pachyonychia congenita 1|Palmoplantar keratoderma, nonepidermolytic, focal 1;Pachyonychia congenita 1|KRT16-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 127
NM_005557.4(KRT16):c.374A>G (p.Asn125Ser)Pathogenic
Palmoplantar keratoderma, nonepidermolytic, focal 1|not provided|Pachyonychia congenita 1|Palmoplantar keratoderma, nonepidermolytic, focal 1;Pachyonychia congenita 1
β˜…β˜…β˜†β˜†2025β†’ Residue 125
NM_005557.4(KRT16):c.371T>A (p.Leu124His)Pathogenic
not provided|Palmoplantar keratoderma, nonepidermolytic, focal 1;Pachyonychia congenita 1
β˜…β˜…β˜†β˜†2021β†’ Residue 124
NM_005557.4(KRT16):c.362T>C (p.Met121Thr)Pathogenic
Pachyonychia congenita 1|not provided|Palmoplantar keratoderma, nonepidermolytic, focal 1;Pachyonychia congenita 1
β˜…β˜…β˜†β˜†2021β†’ Residue 121
NM_005557.4(KRT16):c.1_4dup (p.Thr2fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 2
NM_005557.4(KRT16):c.1252_1255delinsACCTCCAGCGGCG (p.Arg418_Arg419delinsThrSerSerGlyGly)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 418
NM_005557.4(KRT16):c.375T>G (p.Asn125Lys)Likely pathogenic
Pachyonychia congenita 1;Palmoplantar keratoderma, nonepidermolytic, focal 1
β˜…β˜†β˜†β˜†2024β†’ Residue 125
NM_005557.4(KRT16):c.380G>A (p.Arg127His)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 127
NM_005557.4(KRT16):c.39del (p.Ser13_Met14insTer)Likely pathogenic
Palmoplantar keratoderma, nonepidermolytic, focal 1
β˜…β˜†β˜†β˜†2023β†’ Residue 13
NM_005557.4(KRT16):c.395T>C (p.Leu132Pro)Pathogenic
Pachyonychia congenita 1|not provided
β˜…β˜†β˜†β˜†2019β†’ Residue 132
NM_005557.4(KRT16):c.383T>C (p.Leu128Pro)Pathogenic
not provided
β˜…β˜†β˜†β˜†2016β†’ Residue 128
NM_005557.4(KRT16):c.373A>G (p.Asn125Asp)Pathogenic
not provided|Pachyonychia congenita 1
β˜…β˜†β˜†β˜†2016β†’ Residue 125
NM_005557.4(KRT16):c.362T>G (p.Met121Arg)Pathogenic
not provided
β˜…β˜†β˜†β˜†2015β†’ Residue 121
NM_005557.4(KRT16):c.386CCT[1] (p.Ser130del)Pathogenic
Pachyonychia congenita 1|not provided
β˜…β˜†β˜†β˜†2015β†’ Residue 130
NM_005557.4(KRT16):c.365A>G (p.Gln122Arg)Likely pathogenic
Pachyonychia congenita 1
β˜…β˜†β˜†β˜†2014β†’ Residue 122
NM_005557.4(KRT16):c.373_374delinsGG (p.Asn125Gly)Pathogenic
Pachyonychia congenita 1
β˜†β˜†β˜†β˜†2012β†’ Residue 125
NM_005557.4(KRT16):c.383T>A (p.Leu128Gln)Pathogenic
Pachyonychia congenita 1|not provided
β˜†β˜†β˜†β˜†2001β†’ Residue 128
NM_005557.4(KRT16):c.1244_1270delinsGGC (p.Ala415_Glu424delinsGlyGln)Pathogenic
Palmoplantar keratoderma, nonepidermolytic, focal 1
β˜†β˜†β˜†β˜†2000β†’ Residue 415
NM_005557.4(KRT16):c.371T>G (p.Leu124Arg)Pathogenic
Pachyonychia congenita 1|not provided
β˜†β˜†β˜†β˜†2000β†’ Residue 124
View on ClinVar β†—
Related Genes
KRT5Protein interaction87%KRT6AProtein interaction87%KRT6BProtein interaction87%S100A7Protein interaction82%KRT17Protein interaction81%CCHCR1Protein interaction70%
Tissue Expression6 tissues
Liver
100%
Lung
65%
Ovary
47%
Brain
12%
Heart
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
KRT16KRT5KRT6AKRT6BS100A7KRT17CCHCR1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt P08779
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.18LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.91 [0.71–1.18]
RankingsWhere KRT16 stands among ~20K protein-coding genes
  • #2,975of 20,598
    Most Researched152 Β· top quartile
  • #2,094of 5,498
    Most Pathogenic Variants22
  • #12,337of 17,882
    Most Constrained (LOEUF)1.18
Genes detectedKRT16
Sources retrieved26 papers
Response timeβ€”
πŸ“„ Sources
26β–Ό
1
Single-cell transcriptomics combined with interstitial fluid proteomics defines cell type-specific immune regulation in atopic dermatitis.
PMID: 32344053
J Allergy Clin Immunol Β· 2020
1.00
2
Keratin 6, 16 and 17-Critical Barrier Alarmin Molecules in Skin Wounds and Psoriasis.
PMID: 31374826
Cells Β· 2019
0.90
3
Effect of abrocitinib on skin biomarkers in patients with moderate-to-severe atopic dermatitis.
PMID: 38108208
Allergy Β· 2024
0.80
4
Significance of stress keratin expression in normal and diseased epithelia.
PMID: 38299111
iScience Β· 2024
0.76
5
Clinical and Genetic Findings in Patients With Palmoplantar Keratoderma.
PMID: 39630431
JAMA Dermatol Β· 2025
0.70