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3 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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LRRC47
leucine rich repeat containing 47
Chromosome 1 · 1p36.32
NCBI Gene: 57470Ensembl: ENSG00000130764.11HGNC: HGNC:29207UniProt: Q8N1G4
105PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingphenylalanine-tRNA ligase activityphenylalanyl-tRNA aminoacylationneurodegenerative diseaseresponse to diisocyanateasthmaovarian carcinoma
✦AI Summary

LRRC47 is an RNA-binding protein containing leucine-rich repeats that functions in ribosomal 40S subunit maturation. Structurally, LRRC47 binds to late-stage pre-40S ribosomal particles near RIOK1 and the central rRNA helix 44, contributing to the final steps of human ribosome assembly 1. The protein participates in the coordinated removal of ribosomal biogenesis factors and activation of the NOB1 endonuclease required for 18S rRNA maturation 1. In cancer contexts, LRRC47 shows functional relevance to disease progression. Proteomic analysis of prostate cancer identified LRRC47 as a differentially expressed RBP with roles in cancer cell growth, positioning it among RBPs with increased expression in advanced disease 2. Additionally, protein-protein interaction network analysis in hepatocellular carcinoma revealed significant interactions between LRRC47 and PBK, a serine/threonine kinase associated with poor prognosis 3. These findings suggest LRRC47 may contribute to cancer growth and progression, though its specific mechanistic roles in malignancy require further investigation. The dual functions of LRRC47 in normal ribosome biogenesis and altered expression in cancer suggest it may represent a node connecting translational control to oncogenic processes.

Sources cited
1
LRRC47 binds to late pre-40S particles near RIOK1 and central rRNA helix 44 during final steps of human 40S ribosomal subunit maturation
PMID: 33208940
2
LRRC47 is a differentially expressed RNA-binding protein implicated in prostate cancer cell growth
PMID: 37591798
3
LRRC47 shows significant protein-protein interactions with PBK in hepatocellular carcinoma networks
PMID: 35065633
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.36Weak
asthmaOpen Targets
0.02Suggestive
response to diisocyanateOpen Targets
0.02Suggestive
ovarian carcinomaOpen Targets
0.01Suggestive
ataxia telangiectasiaOpen Targets
0.01Suggestive
amyotrophic lateral sclerosisOpen Targets
0.01Suggestive
frontotemporal dementiaOpen Targets
0.01Suggestive
Mobius syndromeOpen Targets
0.01Suggestive
cancerOpen Targets
0.00Suggestive
dermatomyositisOpen Targets
0.00Suggestive
Dravet syndromeOpen Targets
0.00Suggestive
prostate cancerOpen Targets
0.00Suggestive
glioblastomaOpen Targets
0.00Suggestive
Miyoshi myopathyOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
clear cell renal carcinomaOpen Targets
0.00Suggestive
gastric cancerOpen Targets
0.00Suggestive
hepatocellular carcinomaOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
Uterine CarcinosarcomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RPS11Protein interaction100%RPS27Protein interaction100%RPS26Protein interaction100%RPS29Protein interaction100%RPS15AProtein interaction100%RPS14Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Liver
91%
Brain
88%
Ovary
79%
Lung
60%
Bone Marrow
47%
Gene Interaction Network
Click a node to explore
LRRC47RPS11RPS27RPS26RPS29RPS15ARPS14
PROTEIN STRUCTURE
Preparing viewer…
PDB6ZXG · 2.60 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.27LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.93 [0.69–1.27]
RankingsWhere LRRC47 stands among ~20K protein-coding genes
  • #4,537of 20,598
    Most Researched105 · top quartile
  • #13,405of 17,882
    Most Constrained (LOEUF)1.27
Genes detectedLRRC47
Sources retrieved3 papers
Response time—
📄 Sources
3
1
Complementary analysis of proteome-wide proteomics reveals changes in RNA binding protein-profiles during prostate cancer progression.
PMID: 37591798
Cancer Rep (Hoboken) · 2023
1.00
2
High expression of PDZ-binding kinase is correlated with poor prognosis and immune infiltrates in hepatocellular carcinoma.
PMID: 35065633
World J Surg Oncol · 2022
0.67
3
Structural basis for the final steps of human 40S ribosome maturation.
PMID: 33208940
Nature · 2020
0.33