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7 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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LY6G6F
lymphocyte antigen 6 family member G6F
Chromosome 6 · 6p21.33
NCBI Gene: 259215Ensembl: ENSG00000204424.10HGNC: HGNC:13933UniProt: A0A1L6Z9Z3
6PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingplasma membraneplatelet alpha granule membranepsoriasisRomano-Ward syndromeFamilial progressive cardiac conduction defectfamilial atrial fibrillation
✦AI Summary

LY6G6F (lymphocyte antigen 6 family member G6F) is a type I transmembrane protein belonging to the immunoglobulin superfamily that functions as a cell-surface receptor involved in signal transduction. The protein contains four extracellular immunoglobulin-like domains and a cytoplasmic tail with a conserved tyrosine residue (Y281) within a YXN motif 1. Upon phosphorylation, this tyrosine serves as a docking site for adaptor proteins Grb2 and Grb7, coupling LY6G6F to downstream Ras-MAP kinase signaling pathways 1. The protein is expressed on platelet surfaces and becomes phosphorylated in response to collagen-related peptide stimulation through the GPVI collagen receptor 2. Clinically, LY6G6F shows diagnostic relevance across multiple disease contexts. In respiratory syncytial virus (RSV) infection, LY6G6F was identified as a key immune-related gene associated with CD56 bright natural killer cell responses 3. The protein also emerged as a plasma biomarker candidate for cardia gastric cancer progression, contributing to diagnostic panels distinguishing cardia low-grade dysplasia, high-grade dysplasia, and cancer from healthy controls with AUC values exceeding 0.91 4. Additionally, elevated leukocyte LY6G6F expression correlates with superior frontal gyrus atrophy in granulin mutation carriers with frontotemporal lobar degeneration, suggesting involvement in neuroinflammatory pathways underlying neurodegeneration 5.

Sources cited
1
LY6G6F contains a tyrosine residue (Y281) in a YXN motif that recruits Grb2 and Grb7 adaptor proteins upon phosphorylation, coupling to MAP kinase signaling
PMID: 12852788
2
LY6G6F (G6f) is phosphorylated on Tyr-281 in platelet activation by collagen-related peptide through GPVI receptor, providing docking site for Grb2
PMID: 16941570
3
LY6G6F identified as key immune-related gene in RSV infection associated with CD56 bright natural killer cell networks
PMID: 36044931
4
LY6G6F is a candidate plasma biomarker for cardia gastric cancer and precancerous lesions with diagnostic AUC values of 0.91-0.99
PMID: 39036665
5
Elevated leukocyte LY6G6F expression in granulin mutation carriers correlates with superior frontal gyrus atrophy in frontotemporal lobar degeneration
PMID: 23419701
6
LY6G6F ortholog in teleost fish contains ITAM motifs in cytoplasmic tail and is expressed on thrombocytes and erythrocytes
PMID: 20614118
Disease Associationsⓘ20
psoriasisOpen Targets
0.14Weak
Romano-Ward syndromeOpen Targets
0.09Suggestive
Familial progressive cardiac conduction defectOpen Targets
0.08Suggestive
familial atrial fibrillationOpen Targets
0.08Suggestive
hypertrophic cardiomyopathyOpen Targets
0.08Suggestive
Rare familial disorder with hypertrophic cardiomyopathyOpen Targets
0.08Suggestive
Familial short QT syndromeOpen Targets
0.08Suggestive
catecholaminergic polymorphic ventricular tachycardiaOpen Targets
0.07Suggestive
Brugada syndromeOpen Targets
0.07Suggestive
Arrhythmogenic right ventricular dysplasiaOpen Targets
0.07Suggestive
Idiopathic ventricular fibrillation, not Brugada typeOpen Targets
0.07Suggestive
atrial fibrillationOpen Targets
0.07Suggestive
sudden cardiac arrestOpen Targets
0.07Suggestive
cardiac conduction defectOpen Targets
0.06Suggestive
sinoatrial node dysfunction and deafnessOpen Targets
0.06Suggestive
ventricular fibrillation, paroxysmal familial, type 1Open Targets
0.06Suggestive
Atrial stand stillOpen Targets
0.06Suggestive
dilated cardiomyopathyOpen Targets
0.06Suggestive
long QT syndrome 5Open Targets
0.06Suggestive
short QT syndrome type 2Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
GRB7Protein interaction88%LY6G6DProtein interaction87%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
92%
Heart
0%
Brain
0%
Ovary
0%
Liver
0%
Gene Interaction Network
Click a node to explore
LY6G6FGRB7LY6G6D
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q5SQ64
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.04LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.75 [0.55–1.04]
RankingsWhere LY6G6F stands among ~20K protein-coding genes
  • #18,120of 20,598
    Most Researched6
  • #10,356of 17,882
    Most Constrained (LOEUF)1.04
Genes detectedLY6G6F
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
Identification of potential immune/diagnosis related gene-immunocyte subtype networks in extracellular immune response to respiratory syncytial virus infection.
PMID: 36044931
Virus Res · 2022
1.00
2
Identification of plasma proteomic signatures associated with the progression of cardia gastric cancer and precancerous lesions.
PMID: 39036665
J Natl Cancer Cent · 2023
0.86
3
Molecular signature of disease onset in granulin mutation carriers: a gene expression analysis study.
PMID: 23419701
Neurobiol Aging · 2013
0.71
4
Lymphoblast and brain expression of AHI1 and the novel primate-specific gene, C6orf217, in schizophrenia and bipolar disorder.
PMID: 20452750
Schizophr Res · 2010
0.57
5
A molecule in teleost fish, related with human MHC-encoded G6F, has a cytoplasmic tail with ITAM and marks the surface of thrombocytes and in some fishes also of erythrocytes.
PMID: 20614118
Immunogenetics · 2010
0.43