HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
6 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LYRM2
LYR motif containing 2
Chromosome 6 · 6q15
NCBI Gene: 57226Ensembl: ENSG00000083099.12HGNC: HGNC:25229UniProt: Q9NU23
24PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingmitochondrial respiratory chain complex I assemblymitochondrionneurodegenerative diseasehepatocellular carcinomaIGA glomerulonephritisAbnormality of the skeletal system
✦AI Summary

LYRM2 is a mitochondrial protein primarily involved in complex I assembly and function. It directly integrates the N-module into mitochondrial respiratory chain complex I 1, and knockout studies demonstrate that LYRM2 loss impairs NADH-dehydrogenase module assembly, leading to respiratory defects 1. The protein interacts with the mitochondrial acyl-carrier protein NDUFAB1 as part of the LYRM family's essential role in mitochondrial metabolism 1. In cancer contexts, LYRM2 exhibits oncogenic properties distinct from its metabolic role. In colorectal cancer, LYRM2 is upregulated and directly increases complex I activity to enhance oxidative phosphorylation, promoting tumor growth through an Akt-S58phos-LYRM2-Complex I axis 2. In hepatocellular carcinoma, LYRM2 promotes growth and metastasis via an alternative mechanism—interacting with HIF-1α to enhance its stability, thereby promoting glycolysis while inhibiting mitochondrial respiration 3. Beyond cancer, LYRM2 has been identified as a vBMD-associated gene in bone mineral density studies 4 and as a diagnostic biomarker for major depressive disorder as part of a seven-gene mitochondrial signature 5. Environmental factors also influence LYRM2; arsenic exposure associates with significant DNA methylation changes within the LYRM2 gene in placental tissue 6.

Sources cited
1
LYRM2 directly increases complex I activity and promotes oxidative phosphorylation in colorectal cancer cells; operates through an Akt-S58phos-LYRM2-Complex I axis
PMID: 31004700
2
LYRM2 promotes hepatocellular carcinoma growth and metastasis by interacting with HIF-1α to enhance its stability, promoting glycolysis and inhibiting mitochondrial respiration
PMID: 39661026
3
LYRM2 knockout impairs assembly of the NADH-dehydrogenase module of complex I; LYRM2 interacts with mitochondrial acyl-carrier protein NDUFAB1
PMID: 31666358
4
LYRM2 identified as a gene associated with volumetric bone mineral density through transcriptome-wide association study
PMID: 34252604
5
LYRM2 is one of seven mitochondria-related genes with diagnostic utility for major depressive disorder
PMID: 38199392
6
Placental arsenic exposure associates with significant DNA methylation changes at 11 CpG probes within the LYRM2 gene
PMID: 26771251
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.34Weak
hepatocellular carcinomaOpen Targets
0.08Suggestive
IGA glomerulonephritisOpen Targets
0.05Suggestive
Abnormality of the skeletal systemOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.05Suggestive
coronary artery diseaseOpen Targets
0.05Suggestive
alcohol drinkingOpen Targets
0.04Suggestive
drug allergyOpen Targets
0.03Suggestive
ovarian dysfunctionOpen Targets
0.03Suggestive
response to paracetamolOpen Targets
0.03Suggestive
colorectal cancerOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
psoriasisOpen Targets
0.01Suggestive
cirrhosis of liverOpen Targets
0.01Suggestive
osteoporosisOpen Targets
0.00Suggestive
colorectal carcinomaOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
ThymomaOpen Targets
0.00Suggestive
Uveal MelanomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TMEM186Shared pathway100%NDUFAF3Shared pathway100%TIMMDC1Shared pathway100%NDUFAF7Shared pathway100%FOXRED1Shared pathway100%TMEM126BShared pathway100%
Tissue Expression6 tissues
Heart
100%
Brain
81%
Bone Marrow
37%
Liver
34%
Ovary
33%
Lung
31%
Gene Interaction Network
Click a node to explore
LYRM2TMEM186NDUFAF3TIMMDC1NDUFAF7FOXRED1TMEM126B
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9NU23
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.37LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.73 [0.42–1.37]
RankingsWhere LYRM2 stands among ~20K protein-coding genes
  • #13,233of 20,598
    Most Researched24
  • #14,327of 17,882
    Most Constrained (LOEUF)1.37
Genes detectedLYRM2
Sources retrieved6 papers
Response time—
📄 Sources
6▼
1
LYRM2 directly regulates complex I activity to support tumor growth in colorectal cancer by oxidative phosphorylation.
PMID: 31004700
Cancer Lett · 2019
1.00
2
LYRM2 Promotes the Growth and Metastasis of Hepatocellular Carcinoma via Enhancing HIF-1α-Dependent Glucose Metabolic Reprogramming.
PMID: 39661026
J Cell Mol Med · 2024
0.83
3
A transcriptome-wide association study to detect novel genes for volumetric bone mineral density.
PMID: 34252604
Bone · 2021
0.67
4
Identification of 7 mitochondria-related genes as diagnostic biomarkers of MDD and their correlation with immune infiltration: New insights from bioinformatics analysis.
PMID: 38199392
J Affect Disord · 2024
0.50
5
The Mitochondrial Acyl-carrier Protein Interaction Network Highlights Important Roles for LYRM Family Members in Complex I and Mitoribosome Assembly.
PMID: 31666358
Mol Cell Proteomics · 2020
0.33