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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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MAT1A
methionine adenosyltransferase 1A
Chromosome 10 Β· 10q22.3
NCBI Gene: 4143Ensembl: ENSG00000151224.14HGNC: HGNC:6903UniProt: Q00266
81PubMed Papers
21Diseases
0Drugs
41Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
methionine adenosyltransferase activityprotein bindingidentical protein bindingS-adenosylmethionine biosynthetic processmethionine adenosyltransferase deficiencyBrain demyelination due to methionine adenosyltransferase deficiencyhepatic methionine adenosyltransferase deficiencyglaucoma
✦AI Summary

MAT1A (methionine adenosyltransferase 1A) catalyzes the biosynthesis of S-adenosylmethionine (SAM), the principal biological methyl donor in cells, from methionine and ATP 1. This enzyme is predominantly expressed in normal liver tissue, where it generates the majority of cellular SAM 1. MAT1A functions as a metabolic sensor; during fasting, glucagon induces MAT1A expression, causing it to translocate to mitochondria-associated membranes where SAM production modulates fatty acid oxidation and ATP synthesis 2. The enzyme is sensitive to environmental and endogenous stressorsβ€”formaldehyde exposure inhibits MAT1A activity by reacting with critical cysteine residues, reducing SAM production and epigenetic modifications 3. Clinically, MAT1A dysfunction has significant disease implications. Reduced MAT1A expression and SAM levels occur in hepatocellular carcinoma (HCC), contributing to DNA hypomethylation, genomic instability, and activation of oncogenic signaling pathways 4. The MAT1A:MAT2A expression ratio inversely correlates with cell proliferation and genomic instability while predicting patient survival 4. In non-small cell lung cancer, MAT1A promotes glycolysis and cell proliferation by stabilizing cyclin D1 5. Conversely, hepatic MAT1A and its binding partner PHB1 defend against cancer metastasis by suppressing matrix metalloproteinase-7 6. MAT1A deficiency is associated with oxidative stress and steatohepatitis 1, highlighting the critical importance of maintaining physiological SAM levels for liver health.

Sources cited
1
MAT1A is predominantly expressed in normal liver and synthesizes SAM, the principal biological methyl donor; MAT1A deficiency causes oxidative stress, steatohepatitis, and HCC
PMID: 23073625
2
MAT1A is induced by glucagon during fasting and translocates to mitochondria-associated membranes to regulate SAM-dependent metabolic adaptation
PMID: 37527658
3
Formaldehyde inhibits MAT1A activity by reacting with cysteine residues, reducing SAM production and epigenetic modifications
PMID: 37917677
4
MAT1A downregulation occurs in HCC and contributes to DNA hypomethylation, genomic instability, and oncogenic signaling; MAT1A:MAT2A ratio predicts patient survival
PMID: 23665184
5
MAT1A is upregulated in NSCLC and promotes glycolysis and cell proliferation by stabilizing cyclin D1
PMID: 39438468
6
MAT1A and PHB1 cooperate to defend against cancer metastasis by suppressing matrix metalloproteinase-7
PMID: 38086446
Disease Associationsβ“˜21
methionine adenosyltransferase deficiencyOpen Targets
0.81Strong
Brain demyelination due to methionine adenosyltransferase deficiencyOpen Targets
0.65Moderate
hepatic methionine adenosyltransferase deficiencyOpen Targets
0.57Moderate
glaucomaOpen Targets
0.39Weak
neurodegenerative diseaseOpen Targets
0.38Weak
Psychomotor retardation due to S-adenosylhomocysteine hydrolase deficiencyOpen Targets
0.37Weak
open-angle glaucomaOpen Targets
0.35Weak
genetic disorderOpen Targets
0.19Weak
hepatocellular carcinomaOpen Targets
0.11Weak
non-alcoholic steatohepatitisOpen Targets
0.10Suggestive
non-small cell lung carcinomaOpen Targets
0.07Suggestive
breast cancerOpen Targets
0.07Suggestive
acute myeloid leukemiaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
obesityOpen Targets
0.06Suggestive
urinary bladder carcinomaOpen Targets
0.05Suggestive
non-alcoholic fatty liver diseaseOpen Targets
0.05Suggestive
necrotizing enterocolitisOpen Targets
0.05Suggestive
glycine N-methyltransferase deficiencyOpen Targets
0.05Suggestive
Congenital bile acid synthesis defect type 1Open Targets
0.05Suggestive
Methionine adenosyltransferase deficiencyUniProt
Pathogenic Variants41
NM_000429.3(MAT1A):c.964A>G (p.Ile322Val)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2026β†’ Residue 322
NM_000429.3(MAT1A):c.1070C>T (p.Pro357Leu)Pathogenic
Hepatic methionine adenosyltransferase deficiency|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 357
NM_000429.3(MAT1A):c.874C>T (p.Arg292Cys)Pathogenic
Hepatic methionine adenosyltransferase deficiency|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 292
NM_000429.3(MAT1A):c.790C>T (p.Arg264Cys)Pathogenic
Hepatic methionine adenosyltransferase deficiency|MAT1A-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 264
NM_000429.3(MAT1A):c.895C>T (p.Arg299Cys)Pathogenic
not provided|Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 299
NM_000429.3(MAT1A):c.791G>A (p.Arg264His)Pathogenic
Hepatic methionine adenosyltransferase deficiency|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 264
NM_000429.3(MAT1A):c.776C>T (p.Ala259Val)Pathogenic
not provided|Hepatic methionine adenosyltransferase deficiency|MAT1A-related disorder|Colon adenocarcinoma
β˜…β˜…β˜†β˜†2025β†’ Residue 259
NM_000429.3(MAT1A):c.772G>T (p.Asp258Tyr)Pathogenic
Hepatic methionine adenosyltransferase deficiency|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 258
NM_000429.3(MAT1A):c.538_539insTG (p.Ser180fs)Pathogenic
not provided|Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 180
NM_000429.3(MAT1A):c.595C>T (p.Arg199Cys)Pathogenic
Hepatic methionine adenosyltransferase deficiency|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 199
NM_000429.3(MAT1A):c.596G>A (p.Arg199His)Pathogenic
not provided|Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 199
NM_000429.3(MAT1A):c.763C>T (p.Pro255Ser)Pathogenic
not provided|Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 255
NM_000429.3(MAT1A):c.188G>T (p.Gly63Val)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 63
NM_000429.3(MAT1A):c.821G>A (p.Trp274Ter)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2026β†’ Residue 274
NM_000429.3(MAT1A):c.966T>G (p.Ile322Met)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 322
NM_000429.3(MAT1A):c.769G>A (p.Gly257Arg)Likely pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 257
NM_000429.3(MAT1A):c.773A>T (p.Asp258Val)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 258
NM_000429.3(MAT1A):c.260T>A (p.Ile87Asn)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 87
NM_000429.3(MAT1A):c.110T>C (p.Ile37Thr)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 37
NM_000429.3(MAT1A):c.355C>T (p.Gln119Ter)Pathogenic
Hepatic methionine adenosyltransferase deficiency
β˜…β˜†β˜†β˜†2024β†’ Residue 119
View on ClinVar β†—
Related Genes
MTRProtein interaction99%AGXTProtein interaction99%BHMT2Protein interaction98%MAT2BProtein interaction95%TATProtein interaction94%AHCYL2Protein interaction92%
Tissue Expression6 tissues
Liver
100%
Ovary
0%
Bone Marrow
0%
Lung
0%
Heart
0%
Brain
0%
Gene Interaction Network
Click a node to explore
MAT1AMTRAGXTBHMT2MAT2BTATAHCYL2
PROTEIN STRUCTURE
Preparing viewer…
PDB8SWA Β· 2.00 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.65LoF Tolerant
pLIβ“˜
0.06Tolerant
Observed/Expected LoF0.45 [0.31–0.65]
RankingsWhere MAT1A stands among ~20K protein-coding genes
  • #5,874of 20,598
    Most Researched81
  • #1,515of 5,498
    Most Pathogenic Variants41
  • #4,746of 17,882
    Most Constrained (LOEUF)0.65
Genes detectedMAT1A
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Formaldehyde regulates
PMID: 37917677
Science Β· 2023
1.00
2
S-adenosylmethionine in liver health, injury, and cancer.
PMID: 23073625
Physiol Rev Β· 2012
0.90
3
Pleiotropic effects of methionine adenosyltransferases deregulation as determinants of liver cancer progression and prognosis.
PMID: 23665184
J Hepatol Β· 2013
0.80
4
Hepatic levels of S-adenosylmethionine regulate the adaptive response to fasting.
PMID: 37527658
Cell Metab Β· 2023
0.70
5
Human liver methionine cycle: MAT1A and GNMT gene resequencing, functional genomics, and hepatic genotype-phenotype correlation.
PMID: 22807109
Drug Metab Dispos Β· 2012
0.60